Publications

@article{RN50,
   author = {Majeed, R. W. and Fischer, P. and Gunther, A.},
   title = {Accessing OMOP Common Data Model Repositories with the i2b2 Webclient - Algorithm for Automatic Query Translation},
   journal = {Stud Health Technol Inform},
   volume = {278},
   pages = {251-259},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210077 [pii]
10.3233/SHTI210077},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042902
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210077},
   year = {2021},
   type = {Journal Article}
}

@article{RN41,
   author = {Zoch, M. and Gierschner, C. and Peng, Y. and Gruhl, M. and Leutner, L. A. and Sedlmayr, M. and Bathelt, F.},
   title = {Adaption of the OMOP CDM for Rare Diseases},
   journal = {Stud Health Technol Inform},
   volume = {281},
   pages = {138-142},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210136 [pii]
10.3233/SHTI210136},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042721
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210136},
   year = {2021},
   type = {Journal Article}
}

@article{RN10,
   author = {Park, J. and You, S. C. and Jeong, E. and Weng, C. and Park, D. and Roh, J. and Lee, D. Y. and Cheong, J. Y. and Choi, J. W. and Kang, M. and Park, R. W.},
   title = {A Framework (SOCRATex) for Hierarchical Annotation of Unstructured Electronic Health Records and Integration Into a Standardized Medical Database: Development and Usability Study},
   journal = {JMIR Med Inform},
   volume = {9},
   number = {3},
   pages = {e23983},
   ISSN = {2291-9694 (Print)},
   DOI = {v9i3e23983 [pii]
10.2196/23983},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33783361},
   year = {2021},
   type = {Journal Article}
}

@article{RN12,
   author = {Liu, H. and Chi, Y. and Butler, A. and Sun, Y. and Weng, C.},
   title = {A knowledge base of clinical trial eligibility criteria},
   journal = {J Biomed Inform},
   volume = {117},
   pages = {103771},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(21)00100-3 [pii]
10.1016/j.jbi.2021.103771},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33813032},
   year = {2021},
   type = {Journal Article}
}

@article{RN48,
   author = {Shin, H. and Lee, S.},
   title = {An OMOP-CDM based pharmacovigilance data-processing pipeline (PDP) providing active surveillance for ADR signal detection from real-world data sources},
   journal = {BMC Med Inform Decis Mak},
   volume = {21},
   number = {1},
   pages = {159},
   ISSN = {1472-6947 (Electronic)
1472-6947 (Linking)},
   DOI = {10.1186/s12911-021-01520-y
10.1186/s12911-021-01520-y [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34001114
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8130307/pdf/12911_2021_Article_1520.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN62,
   author = {Boudis, F. and Clement, G. and Bruandet, A. and Lamer, A.},
   title = {Automated Generation of Individual and Population Clinical Pathways with the OMOP Common Data Model},
   journal = {Stud Health Technol Inform},
   volume = {281},
   pages = {218-222},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210152 [pii]
10.3233/SHTI210152},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042737
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210152},
   year = {2021},
   type = {Journal Article}
}

@article{RN54,
   author = {Lenert, L. A. and Ilatovskiy, A. V. and Agnew, J. and Rudsill, P. and Jacobs, J. and Weatherston, D. and Deans, K.},
   title = {Automated Production of Research Data Marts from a Canonical Fast Healthcare Interoperability Resource (FHIR) Data Repository: Applications to COVID-19 Research},
   journal = {medRxiv},
   DOI = {10.1101/2021.03.11.21253384},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33758877
https://www.medrxiv.org/content/medrxiv/early/2021/03/12/2021.03.11.21253384.full.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN55,
   author = {Lenert, L. A. and Ilatovskiy, A. V. and Agnew, J. and Rudsill, P. and Jacobs, J. and Weatherston, D. and Deans, K.},
   title = {Automated Production of Research Data Marts from a Canonical Fast Healthcare Interoperability Resource (FHIR) Data Repository: Applications to COVID-19 Research},
   journal = {J Am Med Inform Assoc},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {6276433 [pii]
10.1093/jamia/ocab108},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33993254
https://watermark.silverchair.com/ocab108.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAtIwggLOBgkqhkiG9w0BBwagggK_MIICuwIBADCCArQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMtpdOoaPDMspBK6-WAgEQgIICheX_yiYkhr7eKA7Z2R3GWdD5HWD1cw54tN4YqgOpHrIsRt-miR9rty2fs69JLof3IEOnGMmNKSaUA-RYeW76uuUPA0OiA4JUZzsT1P7ulFEKq7uqLyXtxK6ey9JKTRmwvCCJY32NASI9v_IUwWkr2qLE0zGGcfFhk2G_PdTuheb8jb15h6nasmvHYbNLuFjJldj2SUPf_mTC9UrhMhwX7nKGbZ12idoOT2XUgUCGoPh1HitlBlIAzUDuzmjoXvpRnQ-NnY7KyszC3ENgjLO9O3MzLjALiaBnk4pxdPGtPjyZ3mfq1NGAXntTJtA_Dka1p-wO3jK78rqR3tK54jrzDGXIggFOqMdvQE2le_K68GxNFuQasawW476q_rzKf1wY48PC3T_d1Cw0Te9xjrWWXaOArOnHpGob4GdYSVNEUOrhC_zjrV7Zzc_dJQzmb35HQPEPsLf3MGeRaMtrdMSsxnjBp5UQ7YIfTbGWoIM47VMw-NoxSBQ0UwPhDaHbZxUbe0Vo1RaG1QDUoyAUNLXsaaEh4Am-jqD0PKhnAd4NaNKZjt-ZEaqxDyUWLK-2kTaQe31gMCpnKG8Jj8gF7V_GIUedqiRl1qT8l76wW3uqrIhA8PLzqBfsaXB_mQLHRfzPoOhIJQ2X5UplfPzoZDFDjrJgDX0sDulEnIy4qAtHJXIiQrl-RC0Gkd-kcukZ4rrJTLRXfpuS4P0XnMaB0k9Xah1YQKnqlf91Qu_Gp8n4cZJBBG-bR5n5tOkykSxmgr0w2IQVp-LZMS4wxqXcDr4iL-rYsmQjQEss7kw-7j1vCm5Ot-eak5oblH7kBP9qP95ELUhkxmVyYRuCD6P-qrQqa13eBA1W0Q
https://watermark.silverchair.com/ocab108.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAArgwggK0BgkqhkiG9w0BBwagggKlMIICoQIBADCCApoGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMe8lZIbMftSblAfuaAgEQgIICa73WQ8uZJ3WBrE6HQwiYL9v4EBz7qW3NTN2Uu2erJFVv0rskdUHTYw9ZskTG8aR_wl_49QdLck9mDFqTYsCHNobnONTTR96YPC2rSjGo81n9w8ngyL3EhIXR2V4B9SSz8JI4Yj2otQ-uIunbCtWwPsYZPwdYM9wtAMKxZFuNhdnCLMXxx8Gg1BNh9ZenJ6pSFjv3VkmkMpZ8yuAw0EQxN8rhYEd3QiSv3K_oypeZ6r2szVYp2ghnmDm4rIGre0NO73dT5r-lwSJX_hS-PpW8f0gJ9AYhOArUeDbG2oJ-xUFL3pbfEYrbJvn1YhJTeRL6jDHwgpivBaRL7ZnqopH_cwnBfWRd7-uLLEJEr61dyp3YROpqrjARqX1QYrxtDVTtMsVjVx5xpl4UUSQSQhhiERNfAN0Da51J_TLw2JyOo0PcY4UAghtc_fjHkv6MBsvzPTxKDQrsLrt2WAlfmFIoB-7dls4yD9Ds8ep-KXHLg-HZ8o8sxzoP8fIHOSAlT4njqV5yxw-H3nRzacodgYcoYa4FKoHjwQRGhqUDdxAFSqyQCTaEzSYc440anIR69lxqcV96vL1XKEHVxj_OwKE2-IgguUDEhvk8oRJ32RMQQkCA6CVNngHkqXmxAT1TCz3KCeLHau1AtHsavvBhrHYqMia-Dq559Lt2GJlIjtoIMqy3dkF6zdT4Nop2zmXZkYs7aPmvQcKleRrZTUEZGTiJDFiz1GqcK42DA75S0_QrqjmtFEdaJVdkwgO8whk72j0xFEuR_F5obZBmV5X0zCNe_IKvhEmb_lhWS488KPlCuO0Bjv5x2Johev988mU},
   year = {2021},
   type = {Journal Article}
}

@article{RN42,
   author = {Sun, Y. and Butler, A. and Stewart, L. A. and Liu, H. and Yuan, C. and Southard, C. T. and Kim, J. H. and Weng, C.},
   title = {Building an OMOP common data model-compliant annotated corpus for COVID-19 clinical trials},
   journal = {J Biomed Inform},
   volume = {118},
   pages = {103790},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(21)00119-2 [pii]
10.1016/j.jbi.2021.103790},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33887457
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8079156/pdf/main.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN14,
   author = {Jeon, H. and You, S. C. and Kang, S. Y. and Seo, S. I. and Warner, J. L. and Belenkaya, R. and Park, R. W.},
   title = {Characterizing the Anticancer Treatment Trajectory and Pattern in Patients Receiving Chemotherapy for Cancer Using Harmonized Observational Databases: Retrospective Study},
   journal = {JMIR Med Inform},
   volume = {9},
   number = {4},
   pages = {e25035},
   ISSN = {2291-9694 (Print)},
   DOI = {v9i4e25035 [pii]
10.2196/25035},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33720842},
   year = {2021},
   type = {Journal Article}
}

@article{RN58,
   author = {Kent, S. and Burn, E. and Dawoud, D. and Jonsson, P. and Ostby, J. T. and Hughes, N. and Rijnbeek, P. and Bouvy, J. C.},
   title = {Common Problems, Common Data Model Solutions: Evidence Generation for Health Technology Assessment},
   journal = {Pharmacoeconomics},
   volume = {39},
   number = {3},
   pages = {275-285},
   ISSN = {1179-2027 (Electronic)
1170-7690 (Linking)},
   DOI = {10.1007/s40273-020-00981-9
10.1007/s40273-020-00981-9 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33336320
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7746423/pdf/40273_2020_Article_981.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN64,
   author = {Jensen, E. T. and Dabelea, D. A. and Praveen, P. A. and Amutha, A. and Hockett, C. W. and Isom, S. P. and Ong, T. C. and Mohan, V. and D'Agostino, R., Jr. and Kahn, M. G. and Hamman, R. F. and Wadwa, P. and Dolan, L. and Lawrence, J. M. and Madhu, S. V. and Chhokar, R. and Goel, K. and Tandon, N. and Mayer-Davis, E.},
   title = {Comparison of the incidence of diabetes in United States and Indian youth: An international harmonization of youth diabetes registries},
   journal = {Pediatr Diabetes},
   volume = {22},
   number = {1},
   pages = {8-14},
   ISSN = {1399-5448 (Electronic)
1399-543X (Linking)},
   DOI = {10.1111/pedi.13009},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32196874
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/pedi.13009?download=true
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7748376/pdf/nihms-1648766.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN46,
   author = {Tan, E. H. and Sena, A. G. and Prats-Uribe, A. and You, S. C. and Ahmed, W. U. and Kostka, K. and Reich, C. and Duvall, S. L. and Lynch, K. E. and Matheny, M. E. and Duarte-Salles, T. and Bertolin, S. F. and Hripcsak, G. and Natarajan, K. and Falconer, T. and Spotnitz, M. and Ostropolets, A. and Blacketer, C. and Alshammari, T. M. and Alghoul, H. and Alser, O. and Lane, J. C. E. and Dawoud, D. M. and Shah, K. and Yang, Y. and Zhang, L. and Areia, C. and Golozar, A. and Recalde, M. and Casajust, P. and Jonnagaddala, J. and Subbian, V. and Vizcaya, D. and Lai, L. Y. H. and Nyberg, F. and Morales, D. R. and Posada, J. D. and Shah, N. H. and Gong, M. and Vivekanantham, A. and Abend, A. and Minty, E. P. and Suchard, M. and Rijnbeek, P. and Ryan, P. B. and Prieto-Alhambra, D.},
   title = {COVID-19 in patients with autoimmune diseases: characteristics and outcomes in a multinational network of cohorts across three countries},
   journal = {Rheumatology (Oxford)},
   ISSN = {1462-0332 (Electronic)
1462-0324 (Linking)},
   DOI = {6174122 [pii]
10.1093/rheumatology/keab250},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33725121
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7989171/pdf/keab250.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN44,
   author = {Wang, J. and Abu-El-Rub, N. and Gray, J. and Pham, H. A. and Zhou, Y. and Manion, F. J. and Liu, M. and Song, X. and Xu, H. and Rouhizadeh, M. and Zhang, Y.},
   title = {COVID-19 SignSym: a fast adaptation of a general clinical NLP tool to identify and normalize COVID-19 signs and symptoms to OMOP common data model},
   journal = {J Am Med Inform Assoc},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {6155732 [pii]
10.1093/jamia/ocab015},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33674830
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7989301/pdf/ocab015.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN29,
   author = {Kang, B. and Yoon, J. and Kim, H. Y. and Jo, S. J. and Lee, Y. and Kam, H. J.},
   title = {Deep-learning-based automated terminology mapping in OMOP-CDM},
   journal = {J Am Med Inform Assoc},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {6275415 [pii]
10.1093/jamia/ocab030},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33987667
https://watermark.silverchair.com/ocab030.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAtIwggLOBgkqhkiG9w0BBwagggK_MIICuwIBADCCArQGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMmP2WTNQPlj57Ne27AgEQgIICheSE1Gwl8Z-_Da6ggv4DmAIHQCBiKC6kyTrtaw4mpLGQoQK7WU1sYRQaXTHpwwxrF0Ub6DrYoFIXNmFIDQbK0bZLUNUD7F18S73PsK8Ji38Y5VnyknwDnyM4TvfcG5DaX5WYmzBz_zESn9FYTip-BdA8-mr__DiTqD2FlbJYC0G1bPL-Gv2aaWRkCBGmTrm0AsnnCNQa33ZQrjhhTbh3cuIN8ownvJ3YEBDd6gw-uJ1aOrvDLVz5XmpXLB0teE2oYyDVZFYj8jF7BjHgUKtmdRBinZZlQBTG7ih038jG6SMXGqqhvDLCs1txOqr7EbZqfRGl_mcRJ8Drat-wsnFRrp7Z_HcyN9ET6f2lKqmCZNUy8sIIkl8ZQYRTGet3NPnvcTY-n4OtYEMoUTFjK8asVX9Bunqoo12r4rsVKbeBRkXxmcSStEvgmiRxunkyK3t48g4gqsNd0H7JVDsOSvN3AjEFrjQXLh1Be485tQWiHjWG5sd3assAK_bDJa6u98ABD9NwkRkgoEUuO8YpsU5QJwdiKGL0tce5r2MmLcRawKPy_oJQf7uOH3kWLaObKCwoYMpkSYebd-Aigzymhz1VWjwObSmZjC8nCjRbOiXEsNiEbL3zVn8_WtasoWiClH8NSjrKs8VdvzYSULzvO9Si07lUki2Bl5E_q6Xles69paz1alHQC1LiAWTFY8OYaF1WL2ftBMQ4XLYRhBwg2ptLBPaoHBdeDFCLvHV_od1LEgN8GLDbwGlCyK11VawTu3gXClb6OHJ3Y_jU-oc77teJVqa6g7sOQaSoXeiI3V5xsrFMhjJ5rUFF5INFhRYuCubNrq03UF4vOw1g7YYts7anGWCj74YT8Q
https://academic.oup.com/jamia/advance-article-abstract/doi/10.1093/jamia/ocab030/6275415?redirectedFrom=fulltext},
   year = {2021},
   type = {Journal Article}
}

@article{RN43,
   author = {Sivesind, T. E. and Runion, T. and Branda, M. and Schilling, L. M. and Dellavalle, R. P.},
   title = {Dermatologic Research Potential of the Observational Health Data Sciences and Informatics (OHDSI) Network},
   journal = {Dermatology},
   pages = {1-9},
   ISSN = {1421-9832 (Electronic)
1018-8665 (Linking)},
   DOI = {000514536 [pii]
10.1159/000514536},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33735862
https://www.karger.com/Article/Pdf/514536},
   year = {2021},
   type = {Journal Article}
}

@article{RN59,
   author = {Hripcsak, G. and Schuemie, M. J. and Madigan, D. and Ryan, P. B. and Suchard, M. A.},
   title = {Drawing Reproducible Conclusions from Observational Clinical Data with OHDSI},
   journal = {Yearb Med Inform},
   ISSN = {2364-0502 (Electronic)
0943-4747 (Linking)},
   DOI = {10.1055/s-0041-1726481},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33882595
https://www.thieme-connect.com/products/ejournals/pdf/10.1055/s-0041-1726481.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN9,
   author = {Thurin, N. H. and Lassalle, R. and Schuemie, M. and Penichon, M. and Gagne, J. J. and Rassen, J. A. and Benichou, J. and Weill, A. and Blin, P. and Moore, N. and Droz-Perroteau, C.},
   title = {Empirical assessment of case-based methods for identification of drugs associated with acute liver injury in the French National Healthcare System database (SNDS)},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {30},
   number = {3},
   pages = {320-333},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.5161},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33099844
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pds.5161?download=true},
   year = {2021},
   type = {Journal Article}
}

@article{RN11,
   author = {Oh, S. and Sung, M. and Rhee, Y. and Hong, N. and Park, Y. R.},
   title = {Evaluation of the Privacy Risks of Personal Health Identifiers and Quasi-Identifiers in a Distributed Research Network: Development and Validation Study},
   journal = {JMIR Med Inform},
   volume = {9},
   number = {5},
   pages = {e24940},
   ISSN = {2291-9694 (Print)},
   DOI = {v9i5e24940 [pii]
10.2196/24940},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34057426},
   year = {2021},
   type = {Journal Article}
}

@article{RN17,
   author = {Belenkaya, R. and Gurley, M. J. and Golozar, A. and Dymshyts, D. and Miller, R. T. and Williams, A. E. and Ratwani, S. and Siapos, A. and Korsik, V. and Warner, J. and Campbell, W. S. and Rivera, D. and Banokina, T. and Modina, E. and Bethusamy, S. and Stewart, H. M. and Patel, M. and Chen, R. and Falconer, T. and Park, R. W. and You, S. C. and Jeon, H. and Shin, S. J. and Reich, C.},
   title = {Extending the OMOP Common Data Model and Standardized Vocabularies to Support Observational Cancer Research},
   journal = {JCO Clin Cancer Inform},
   volume = {5},
   pages = {12-20},
   ISSN = {2473-4276 (Electronic)
2473-4276 (Linking)},
   DOI = {10.1200/CCI.20.00079},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33411620},
   year = {2021},
   type = {Journal Article}
}

@article{RN45,
   author = {Rinaldi, E. and Thun, S.},
   title = {From OpenEHR to FHIR and OMOP Data Model for Microbiology Findings},
   journal = {Stud Health Technol Inform},
   volume = {281},
   pages = {402-406},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210189 [pii]
10.3233/SHTI210189},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042774
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210189},
   year = {2021},
   type = {Journal Article}
}

@article{RN49,
   author = {Majeed, R. W. and Stohr, M. R. and Gunther, A.},
   title = {HIStream-Import: A Generic ETL Framework for Processing Arbitrary Patient Data Collections or Hospital Information Systems into HL7 FHIR Bundles},
   journal = {Stud Health Technol Inform},
   volume = {278},
   pages = {75-79},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210053 [pii]
10.3233/SHTI210053},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042878
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210053},
   year = {2021},
   type = {Journal Article}
}

@article{RN13,
   author = {Reps, J. M. and Kim, C. and Williams, R. D. and Markus, A. F. and Yang, C. and Duarte-Salles, T. and Falconer, T. and Jonnagaddala, J. and Williams, A. and Fernandez-Bertolin, S. and DuVall, S. L. and Kostka, K. and Rao, G. and Shoaibi, A. and Ostropolets, A. and Spotnitz, M. E. and Zhang, L. and Casajust, P. and Steyerberg, E. W. and Nyberg, F. and Kaas-Hansen, B. S. and Choi, Y. H. and Morales, D. and Liaw, S. T. and Abrahao, M. T. F. and Areia, C. and Matheny, M. E. and Lynch, K. E. and Aragon, M. and Park, R. W. and Hripcsak, G. and Reich, C. G. and Suchard, M. A. and You, S. C. and Ryan, P. B. and Prieto-Alhambra, D. and Rijnbeek, P. R.},
   title = {Implementation of the COVID-19 Vulnerability Index Across an International Network of Health Care Data Sets: Collaborative External Validation Study},
   journal = {JMIR Med Inform},
   volume = {9},
   number = {4},
   pages = {e21547},
   ISSN = {2291-9694 (Print)},
   DOI = {v9i4e21547 [pii]
10.2196/21547},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33661754},
   year = {2021},
   type = {Journal Article}
}

@article{RN47,
   author = {Seong, Y. and You, S. C. and Ostropolets, A. and Rho, Y. and Park, J. and Cho, J. and Dymshyts, D. and Reich, C. G. and Heo, Y. and Park, R. W.},
   title = {Incorporation of Korean Electronic Data Interchange Vocabulary into Observational Medical Outcomes Partnership Vocabulary},
   journal = {Healthc Inform Res},
   volume = {27},
   number = {1},
   pages = {29-38},
   ISSN = {2093-3681 (Print)
2093-3681 (Linking)},
   DOI = {hir.2021.27.1.29 [pii]
10.4258/hir.2021.27.1.29},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33611874
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7921574/pdf/hir-27-1-29.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN25,
   author = {Maier, C. and Kapsner, L. A. and Mate, S. and Prokosch, H. U. and Kraus, S.},
   title = {Patient Cohort Identification on Time Series Data Using the OMOP Common Data Model},
   journal = {Appl Clin Inform},
   volume = {12},
   number = {1},
   pages = {57-64},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0040-1721481},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33506478
https://www.thieme-connect.com/products/ejournals/pdf/10.1055/s-0040-1721481.pdf
https://www.thieme-connect.com/products/ejournals/abstract/10.1055/s-0040-1721481},
   year = {2021},
   type = {Journal Article}
}

@article{RN60,
   author = {Dimitriadis, V. K. and Gavriilidis, G. I. and Natsiavas, P.},
   title = {Pharmacovigilance and Clinical Environment: Utilizing OMOP-CDM and OHDSI Software Stack to Integrate EHR Data},
   journal = {Stud Health Technol Inform},
   volume = {281},
   pages = {555-559},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210232 [pii]
10.3233/SHTI210232},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042637
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210232},
   year = {2021},
   type = {Journal Article}
}

@article{RN61,
   author = {Chen, Z. and Liu, H. and Butler, A. and Ostropolets, A. and Weng, C.},
   title = {Potential Role of Clinical Trial Eligibility Criteria in Electronic Phenotyping},
   journal = {Stud Health Technol Inform},
   volume = {281},
   pages = {148-152},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI210138 [pii]
10.3233/SHTI210138},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34042723
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210138},
   year = {2021},
   type = {Journal Article}
}

@article{RN52,
   author = {Morales, D. R. and Conover, M. M. and You, S. C. and Pratt, N. and Kostka, K. and Duarte-Salles, T. and Fernandez-Bertolin, S. and Aragon, M. and DuVall, S. L. and Lynch, K. and Falconer, T. and van Bochove, K. and Sung, C. and Matheny, M. E. and Lambert, C. G. and Nyberg, F. and Alshammari, T. M. and Williams, A. E. and Park, R. W. and Weaver, J. and Sena, A. G. and Schuemie, M. J. and Rijnbeek, P. R. and Williams, R. D. and Lane, J. C. E. and Prats-Uribe, A. and Zhang, L. and Areia, C. and Krumholz, H. M. and Prieto-Alhambra, D. and Ryan, P. B. and Hripcsak, G. and Suchard, M. A.},
   title = {Renin-angiotensin system blockers and susceptibility to COVID-19: an international, open science, cohort analysis},
   journal = {Lancet Digit Health},
   volume = {3},
   number = {2},
   pages = {e98-e114},
   ISSN = {2589-7500 (Electronic)
2589-7500 (Linking)},
   DOI = {S2589-7500(20)30289-2 [pii]
10.1016/S2589-7500(20)30289-2},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33342753
https://www.thelancet.com/pdfs/journals/landig/PIIS2589-7500(20)30289-2.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN57,
   author = {Kim, G. L. and Yi, Y. H. and Hwang, H. R. and Kim, J. and Park, Y. and Kim, Y. J. and Lee, J. G. and Tak, Y. J. and Lee, S. H. and Lee, S. Y. and Cho, Y. H. and Park, E. J. and Lee, Y.},
   title = {The Risk of Osteoporosis and Osteoporotic Fracture Following the Use of Irritable Bowel Syndrome Medical Treatment: An Analysis Using the OMOP CDM Database},
   journal = {J Clin Med},
   volume = {10},
   number = {9},
   ISSN = {2077-0383 (Print)
2077-0383 (Linking)},
   DOI = {jcm10092044 [pii]
10.3390/jcm10092044},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/34068814
https://res.mdpi.com/d_attachment/jcm/jcm-10-02044/article_deploy/jcm-10-02044.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN56,
   author = {Kim, J. W. and Kim, S. and Ryu, B. and Song, W. and Lee, H. Y. and Yoo, S.},
   title = {Transforming electronic health record polysomnographic data into the Observational Medical Outcome Partnership's Common Data Model: a pilot feasibility study},
   journal = {Sci Rep},
   volume = {11},
   number = {1},
   pages = {7013},
   ISSN = {2045-2322 (Electronic)
2045-2322 (Linking)},
   DOI = {10.1038/s41598-021-86564-w
10.1038/s41598-021-86564-w [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33782494
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8007756/pdf/41598_2021_Article_86564.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN51,
   author = {Prieto-Alhambra, D. and Kostka, K. and Duarte-Salles, T. and Prats-Uribe, A. and Sena, A. and Pistillo, A. and Khalid, S. and Lai, L. and Golozar, A. and Alshammari, T. M. and Dawoud, D. and Nyberg, F. and Wilcox, A. and Andryc, A. and Williams, A. and Ostropolets, A. and Areia, C. and Jung, C. Y. and Harle, C. and Reich, C. and Blacketer, C. and Morales, D. and Dorr, D. A. and Burn, E. and Roel, E. and Tan, E. H. and Minty, E. and DeFalco, F. and de Maeztu, G. and Lipori, G. and Alghoul, H. and Zhu, H. and Thomas, J. and Bian, J. and Park, J. and Roldan, J. M. and Posada, J. and Banda, J. M. and Horcajada, J. P. and Kohler, J. and Shah, K. and Natarajan, K. and Lynch, K. and Liu, L. and Schilling, L. and Recalde, M. and Spotnitz, M. and Gong, M. and Matheny, M. and Valveny, N. and Weiskopf, N. and Shah, N. and Alser, O. and Casajust, P. and Park, R. W. and Schuff, R. and Seager, S. and DuVall, S. and You, S. C. and Song, S. and Fernandez-Bertolin, S. and Fortin, S. and Magoc, T. and Falconer, T. and Subbian, V. and Huser, V. and Ahmed, W. U. and Carter, W. and Guan, Y. and Galvan, Y. and He, X. and Rijnbeek, P. and Hripcsak, G. and Ryan, P. and Suchard, M.},
   title = {Unraveling COVID-19: a large-scale characterization of 4.5 million COVID-19 cases using CHARYBDIS},
   journal = {Res Sq},
   DOI = {10.21203/rs.3.rs-279400/v1},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33688639
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7941629/pdf/nihpp-rs279400v1.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN53,
   author = {Prats-Uribe, A. and Sena, A. G. and Lai, L. Y. H. and Ahmed, W. U. and Alghoul, H. and Alser, O. and Alshammari, T. M. and Areia, C. and Carter, W. and Casajust, P. and Dawoud, D. and Golozar, A. and Jonnagaddala, J. and Mehta, P. P. and Gong, M. and Morales, D. R. and Nyberg, F. and Posada, J. D. and Recalde, M. and Roel, E. and Shah, K. and Shah, N. H. and Schilling, L. M. and Subbian, V. and Vizcaya, D. and Zhang, L. and Zhang, Y. and Zhu, H. and Liu, L. and Cho, J. and Lynch, K. E. and Matheny, M. E. and You, S. C. and Rijnbeek, P. R. and Hripcsak, G. and Lane, J. C. and Burn, E. and Reich, C. and Suchard, M. A. and Duarte-Salles, T. and Kostka, K. and Ryan, P. B. and Prieto-Alhambra, D.},
   title = {Use of repurposed and adjuvant drugs in hospital patients with covid-19: multinational network cohort study},
   journal = {BMJ},
   volume = {373},
   pages = {n1038},
   ISSN = {1756-1833 (Electronic)
0959-8138 (Linking)},
   DOI = {10.1136/bmj.n1038},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33975825
https://www.bmj.com/content/bmj/373/bmj.n1038.full.pdf},
   year = {2021},
   type = {Journal Article}
}

@article{RN212,
   author = {Yuan, Z. and DeFalco, F. and Wang, L. and Hester, L. and Weaver, J. and Swerdel, J. N. and Freedman, A. and Ryan, P. and Schuemie, M. and Qiu, R. and Yee, J. and Meininger, G. and Berlin, J. A. and Rosenthal, N.},
   title = {Acute pancreatitis risk in type 2 diabetes patients treated with canagliflozin versus other antihyperglycemic agents: an observational claims database study},
   journal = {Curr Med Res Opin},
   volume = {36},
   number = {7},
   pages = {1117-1124},
   ISSN = {0300-7995},
   DOI = {10.1080/03007995.2020.1761312},
   year = {2020},
   type = {Journal Article}
}

@article{RN73,
   author = {Ostropolets, A. and Reich, C. and Ryan, P. and Shang, N. and Hripcsak, G. and Weng, C.},
   title = {Adapting electronic health records-derived phenotypes to claims data: Lessons learned in using limited clinical data for phenotyping},
   journal = {J Biomed Inform},
   volume = {102},
   pages = {103363},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30283-7 [pii]
10.1016/j.jbi.2019.103363},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31866433
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7390483/pdf/nihms-1548044.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN174,
   author = {Burn, E. and You, S. C. and Sena, A. G. and Kostka, K. and Abedtash, H. and Abrahao, M. T. F. and Alberga, A. and Alghoul, H. and Alser, O. and Alshammari, T. M. and Areia, C. and Banda, J. M. and Cho, J. and Culhane, A. C. and Davydov, A. and DeFalco, F. J. and Duarte-Salles, T. and DuVall, S. and Falconer, T. and Gao, W. and Golozar, A. and Hardin, J. and Hripcsak, G. and Huser, V. and Jeon, H. and Jing, Y. and Jung, C. Y. and Kaas-Hansen, B. S. and Kaduk, D. and Kent, S. and Kim, Y. and Kolovos, S. and Lane, J. C. E. and Lee, H. and Lynch, K. E. and Makadia, R. and Matheny, M. E. and Mehta, P. and Morales, D. R. and Natarajan, K. and Nyberg, F. and Ostropolets, A. and Park, R. W. and Park, J. and Posada, J. D. and Prats-Uribe, A. and Rao, G. and Reich, C. and Rho, Y. and Rijnbeek, P. and Sathappan, S. M. K. and Schilling, L. M. and Schuemie, M. and Shah, N. H. and Shoaibi, A. and Song, S. and Spotnitz, M. and Suchard, M. A. and Swerdel, J. N. and Vizcaya, D. and Volpe, S. and Wen, H. and Williams, A. E. and Yimer, B. B. and Zhang, L. and Zhuk, O. and Prieto-Alhambra, D. and Ryan, P.},
   title = {An international characterisation of patients hospitalised with COVID-19 and a comparison with those previously hospitalised with influenza},
   journal = {medRxiv},
   DOI = {10.1101/2020.04.22.20074336},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32511443
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239064/pdf/nihpp-2020.04.22.20074336.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN200,
   author = {Brauer, R. and Wong, I. C. K. and Man, K. K. and Pratt, N. L. and Park, R. W. and Cho, S. Y. and Li, Y. J. and Iqbal, U. and Nguyen, P. A. and Schuemie, M.},
   title = {Application of a Common Data Model (CDM) to rank the paediatric user and prescription prevalence of 15 different drug classes in South Korea, Hong Kong, Taiwan, Japan and Australia: an observational, descriptive study},
   journal = {BMJ Open},
   volume = {10},
   number = {1},
   pages = {e032426},
   ISSN = {2044-6055},
   DOI = {10.1136/bmjopen-2019-032426},
   year = {2020},
   type = {Journal Article}
}

@article{RN175,
   author = {Cho, J. and You, S. C. and Lee, S. and Park, D. and Park, B. and Hripcsak, G. and Park, R. W.},
   title = {Application of Epidemiological Geographic Information System: An Open-Source Spatial Analysis Tool Based on the OMOP Common Data Model},
   journal = {Int J Environ Res Public Health},
   volume = {17},
   number = {21},
   ISSN = {1660-4601 (Electronic)
1660-4601 (Linking)},
   DOI = {ijerph17217824 [pii]
10.3390/ijerph17217824},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33114631
https://res.mdpi.com/d_attachment/ijerph/ijerph-17-07824/article_deploy/ijerph-17-07824-v2.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN181,
   author = {Candore, G. and Hedenmalm, K. and Slattery, J. and Cave, A. and Kurz, X. and Arlett, P.},
   title = {Can We Rely on Results From IQVIA Medical Research Data UK Converted to the Observational Medical Outcome Partnership Common Data Model?: A Validation Study Based on Prescribing Codeine in Children},
   journal = {Clin Pharmacol Ther},
   volume = {107},
   number = {4},
   pages = {915-925},
   ISSN = {1532-6535 (Electronic)
0009-9236 (Linking)},
   DOI = {10.1002/cpt.1785},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31956997
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7158210/pdf/CPT-107-915.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN205,
   author = {Weinstein, R. B. and Ryan, P. B. and Berlin, J. A. and Schuemie, M. J. and Swerdel, J. and Fife, D.},
   title = {Channeling Bias in the Analysis of Risk of Myocardial Infarction, Stroke, Gastrointestinal Bleeding, and Acute Renal Failure with the Use of Paracetamol Compared with Ibuprofen},
   journal = {Drug Saf},
   volume = {43},
   number = {9},
   pages = {927-942},
   ISSN = {0114-5916 (Print)
0114-5916},
   DOI = {10.1007/s40264-020-00950-3},
   year = {2020},
   type = {Journal Article}
}

@article{RN78,
   author = {Kim, H. and Yoo, S. and Jeon, Y. and Yi, S. and Kim, S. and Choi, S. A. and Hwang, H. and Kim, K. J.},
   title = {Characterization of Anti-seizure Medication Treatment Pathways in Pediatric Epilepsy Using the Electronic Health Record-Based Common Data Model},
   journal = {Front Neurol},
   volume = {11},
   pages = {409},
   ISSN = {1664-2295 (Print)
1664-2295 (Linking)},
   DOI = {10.3389/fneur.2020.00409},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32477256
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7235379/pdf/fneur-11-00409.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN72,
   author = {Ostropolets, A. and Reich, C. and Ryan, P. and Weng, C. and Molinaro, A. and DeFalco, F. and Jonnagaddala, J. and Liaw, S. T. and Jeon, H. and Park, R. W. and Spotnitz, M. E. and Natarajan, K. and Argyriou, G. and Kostka, K. and Miller, R. and Williams, A. and Minty, E. and Posada, J. and Hripcsak, G.},
   title = {Characterizing database granularity using SNOMED-CT hierarchy},
   journal = {AMIA Annu Symp Proc},
   volume = {2020},
   pages = {983-992},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   DOI = {134_3416797 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33936474
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8075504/pdf/134_3416797.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN189,
   author = {Davidson, L. and Boland, M. R.},
   title = {Comparative Analysis and Evaluation of State-of-the-Art Medication Mapping Tools to Transform a Local Medication Terminology to RxNorm},
   journal = {AMIA Jt Summits Transl Sci Proc},
   volume = {2020},
   pages = {126-135},
   ISSN = {2153-4063 (Print)},
   year = {2020},
   type = {Journal Article}
}

@article{RN80,
   author = {Kim, Y. and Tian, Y. and Yang, J. and Huser, V. and Jin, P. and Lambert, C. G. and Park, H. and You, S. C. and Park, R. W. and Rijnbeek, P. R. and Van Zandt, M. and Reich, C. and Vashisht, R. and Wu, Y. and Duke, J. and Hripcsak, G. and Madigan, D. and Shah, N. H. and Ryan, P. B. and Schuemie, M. J. and Suchard, M. A.},
   title = {Comparative safety and effectiveness of alendronate versus raloxifene in women with osteoporosis},
   journal = {Sci Rep},
   volume = {10},
   number = {1},
   pages = {11115},
   ISSN = {2045-2322 (Electronic)
2045-2322 (Linking)},
   DOI = {10.1038/s41598-020-68037-8
10.1038/s41598-020-68037-8 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32632237
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7338498/pdf/41598_2020_Article_68037.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN208,
   author = {Hripcsak, G. and Suchard, M. A. and Shea, S. and Chen, R. and You, S. C. and Pratt, N. and Madigan, D. and Krumholz, H. M. and Ryan, P. B. and Schuemie, M. J.},
   title = {Comparison of Cardiovascular and Safety Outcomes of Chlorthalidone vs Hydrochlorothiazide to Treat Hypertension},
   journal = {JAMA Intern Med},
   volume = {180},
   number = {4},
   pages = {542-551},
   ISSN = {2168-6106 (Print)
2168-6106},
   DOI = {10.1001/jamainternmed.2019.7454},
   year = {2020},
   type = {Journal Article}
}

@article{RN209,
   author = {You, S. C. and Jung, S. and Swerdel, J. N. and Ryan, P. B. and Schuemie, M. J. and Suchard, M. A. and Lee, S. and Cho, J. and Hripcsak, G. and Park, R. W. and Park, S.},
   title = {Comparison of First-Line Dual Combination Treatments in Hypertension: Real-World Evidence from Multinational Heterogeneous Cohorts},
   journal = {Korean Circ J},
   volume = {50},
   number = {1},
   pages = {52-68},
   ISSN = {1738-5520 (Print)
1738-5520},
   DOI = {10.4070/kcj.2019.0173},
   year = {2020},
   type = {Journal Article}
}

@article{RN23,
   author = {Cho, S. and Sin, M. and Tsapepas, D. and Dale, L. A. and Husain, S. A. and Mohan, S. and Natarajan, K.},
   title = {Content Coverage Evaluation of the OMOP Vocabulary on the Transplant Domain Focusing on Concepts Relevant for Kidney Transplant Outcomes Analysis},
   journal = {Appl Clin Inform},
   volume = {11},
   number = {4},
   pages = {650-658},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0040-1716528},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33027834
https://www.thieme-connect.com/products/ejournals/abstract/10.1055/s-0040-1716528},
   year = {2020},
   type = {Journal Article}
}

@article{RN24,
   author = {Ji, H. and Kim, S. and Yi, S. and Hwang, H. and Kim, J. W. and Yoo, S.},
   title = {Converting clinical document architecture documents to the common data model for incorporating health information exchange data in observational health studies: CDA to CDM},
   journal = {J Biomed Inform},
   volume = {107},
   pages = {103459},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(20)30087-3 [pii]
10.1016/j.jbi.2020.103459},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32470694},
   year = {2020},
   type = {Journal Article}
}

@article{RN82,
   author = {Fischer, P. and Stohr, M. R. and Gall, H. and Michel-Backofen, A. and Majeed, R. W.},
   title = {Data Integration into OMOP CDM for Heterogeneous Clinical Data Collections via HL7 FHIR Bundles and XSLT},
   journal = {Stud Health Technol Inform},
   volume = {270},
   pages = {138-142},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI200138 [pii]
10.3233/SHTI200138},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32570362
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI200138},
   year = {2020},
   type = {Journal Article}
}

@article{RN179,
   author = {Bompelli, A. and Li, J. and Xu, Y. and Wang, N. and Wang, Y. and Adam, T. and He, Z. and Zhang, R.},
   title = {Deep Learning Approach to Parse Eligibility Criteria in Dietary Supplements Clinical Trials Following OMOP Common Data Model},
   journal = {AMIA Annu Symp Proc},
   volume = {2020},
   pages = {243-252},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   DOI = {056_3415023 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33936396
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8075443/pdf/056_3415023.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN197,
   author = {Weng, C. and Shah, N. H. and Hripcsak, G.},
   title = {Deep phenotyping: Embracing complexity and temporality-Towards scalability, portability, and interoperability},
   journal = {J Biomed Inform},
   volume = {105},
   pages = {103433},
   ISSN = {1532-0464 (Print)
1532-0464},
   DOI = {10.1016/j.jbi.2020.103433},
   year = {2020},
   type = {Journal Article}
}

@article{RN71,
   author = {Reinecke, I. and Gulden, C. and Kummel, M. and Nassirian, A. and Blasini, R. and Sedlmayr, M.},
   title = {Design for a Modular Clinical Trial Recruitment Support System Based on FHIR and OMOP},
   journal = {Stud Health Technol Inform},
   volume = {270},
   pages = {158-162},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI200142 [pii]
10.3233/SHTI200142},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32570366
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI200142},
   year = {2020},
   type = {Journal Article}
}

@article{RN15,
   author = {Yu, Y. and Ruddy, K. and Mansfield, A. and Zong, N. and Wen, A. and Tsuji, S. and Huang, M. and Liu, H. and Shah, N. and Jiang, G.},
   title = {Detecting and Filtering Immune-Related Adverse Events Signal Based on Text Mining and Observational Health Data Sciences and Informatics Common Data Model: Framework Development Study},
   journal = {JMIR Med Inform},
   volume = {8},
   number = {6},
   pages = {e17353},
   ISSN = {2291-9694 (Print)},
   DOI = {v8i6e17353 [pii]
10.2196/17353},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32530430},
   year = {2020},
   type = {Journal Article}
}

@article{RN70,
   author = {Swerdel, J. N. and Reps, J. M. and Fife, D. and Ryan, P. B.},
   title = {Developing Predictive Models to Determine Patients in End-of-Life Care in Administrative Datasets},
   journal = {Drug Saf},
   volume = {43},
   number = {5},
   pages = {447-455},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-020-00906-7
10.1007/s40264-020-00906-7 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31939079
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7165142/pdf/40264_2020_Article_906.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN66,
   author = {Wang, Q. and Reps, J. M. and Kostka, K. F. and Ryan, P. B. and Zou, Y. and Voss, E. A. and Rijnbeek, P. R. and Chen, R. and Rao, G. A. and Morgan Stewart, H. and Williams, A. E. and Williams, R. D. and Van Zandt, M. and Falconer, T. and Fernandez-Chas, M. and Vashisht, R. and Pfohl, S. R. and Shah, N. H. and Kasthurirathne, S. N. and You, S. C. and Jiang, Q. and Reich, C. and Zhou, Y.},
   title = {Development and validation of a prognostic model predicting symptomatic hemorrhagic transformation in acute ischemic stroke at scale in the OHDSI network},
   journal = {PLoS One},
   volume = {15},
   number = {1},
   pages = {e0226718},
   ISSN = {1932-6203 (Electronic)
1932-6203 (Linking)},
   DOI = {10.1371/journal.pone.0226718
PONE-D-19-25005 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31910437
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6946584/pdf/pone.0226718.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN79,
   author = {Kashyap, M. and Seneviratne, M. and Banda, J. M. and Falconer, T. and Ryu, B. and Yoo, S. and Hripcsak, G. and Shah, N. H.},
   title = {Development and validation of phenotype classifiers across multiple sites in the observational health data sciences and informatics network},
   journal = {J Am Med Inform Assoc},
   volume = {27},
   number = {6},
   pages = {877-883},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5831103 [pii]
10.1093/jamia/ocaa032},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32374408
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7309227/pdf/ocaa032.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN21,
   author = {Choi, Y. I. and Kim, Y. J. and Chung, J. W. and Kim, K. O. and Kim, H. and Park, R. W. and Park, D. K.},
   title = {Effect of Age on the Initiation of Biologic Agent Therapy in Patients With Inflammatory Bowel Disease: Korean Common Data Model Cohort Study},
   journal = {JMIR Med Inform},
   volume = {8},
   number = {4},
   pages = {e15124},
   ISSN = {2291-9694 (Print)},
   DOI = {v8i4e15124 [pii]
10.2196/15124},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32293578},
   year = {2020},
   type = {Journal Article}
}

@article{RN69,
   author = {Unberath, P. and Prokosch, H. U. and Grundner, J. and Erpenbeck, M. and Maier, C. and Christoph, J.},
   title = {EHR-Independent Predictive Decision Support Architecture Based on OMOP},
   journal = {Appl Clin Inform},
   volume = {11},
   number = {3},
   pages = {399-404},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0040-1710393},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32492716
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7269719/pdf/10-1055-s-0040-1710393.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN28,
   author = {Thurin, N. H. and Lassalle, R. and Schuemie, M. and Penichon, M. and Gagne, J. J. and Rassen, J. A. and Benichou, J. and Weill, A. and Blin, P. and Moore, N. and Droz-Perroteau, C.},
   title = {Empirical assessment of case-based methods for drug safety alert identification in the French National Healthcare System database (SNDS): Methodology of the ALCAPONE project},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {29},
   number = {9},
   pages = {993-1000},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.4983},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32133717
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pds.4983?download=true
https://onlinelibrary.wiley.com/doi/10.1002/pds.4983},
   year = {2020},
   type = {Journal Article}
}

@article{RN26,
   author = {Thurin, N. H. and Lassalle, R. and Schuemie, M. and Penichon, M. and Gagne, J. J. and Rassen, J. A. and Benichou, J. and Weill, A. and Blin, P. and Moore, N. and Droz-Perroteau, C.},
   title = {Empirical assessment of case-based methods for identification of drugs associated with upper gastrointestinal bleeding in the French National Healthcare System database (SNDS)},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {29},
   number = {8},
   pages = {890-903},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.5038},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32524701
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pds.5038?download=true
https://onlinelibrary.wiley.com/doi/abs/10.1002/pds.5038},
   year = {2020},
   type = {Journal Article}
}

@article{RN19,
   author = {Tian, Y. and Chen, W. and Zhou, T. and Li, J. and Ding, K. and Li, J.},
   title = {Establishment and evaluation of a multicenter collaborative prediction model construction framework supporting model generalization and continuous improvement: A pilot study},
   journal = {Int J Med Inform},
   volume = {141},
   pages = {104173},
   ISSN = {1872-8243 (Electronic)
1386-5056 (Linking)},
   DOI = {S1386-5056(20)30136-2 [pii]
10.1016/j.ijmedinf.2020.104173},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32531725},
   year = {2020},
   type = {Journal Article}
}

@article{RN83,
   author = {Dixon, B. E. and Wen, C. and French, T. and Williams, J. L. and Duke, J. D. and Grannis, S. J.},
   title = {Extending an open-source tool to measure data quality: case report on Observational Health Data Science and Informatics (OHDSI)},
   journal = {BMJ Health Care Inform},
   volume = {27},
   number = {1},
   ISSN = {2632-1009 (Electronic)
2632-1009 (Linking)},
   DOI = {bmjhci-2019-100054 [pii]
10.1136/bmjhci-2019-100054},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32229499
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7254131/pdf/bmjhci-2019-100054.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN84,
   author = {Reps, J. M. and Williams, R. D. and You, S. C. and Falconer, T. and Minty, E. and Callahan, A. and Ryan, P. B. and Park, R. W. and Lim, H. S. and Rijnbeek, P.},
   title = {Feasibility and evaluation of a large-scale external validation approach for patient-level prediction in an international data network: validation of models predicting stroke in female patients newly diagnosed with atrial fibrillation},
   journal = {BMC Med Res Methodol},
   volume = {20},
   number = {1},
   pages = {102},
   ISSN = {1471-2288 (Electronic)
1471-2288 (Linking)},
   DOI = {10.1186/s12874-020-00991-3
10.1186/s12874-020-00991-3 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32375693
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7201646/pdf/12874_2020_Article_991.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN88,
   author = {Schuemie, M. J. and Cepeda, M. S. and Suchard, M. A. and Yang, J. and Tian, Y. and Schuler, A. and Ryan, P. B. and Madigan, D. and Hripcsak, G.},
   title = {How Confident Are We about Observational Findings in Healthcare: A Benchmark Study},
   journal = {Harv Data Sci Rev},
   volume = {2},
   number = {1},
   ISSN = {2644-2353 (Electronic)
2644-2353 (Linking)},
   DOI = {10.1162/99608f92.147cc28e},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33367288
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7755157/pdf/nihms-1651845.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN199,
   author = {Kumar, P. and Nestsiarovich, A. and Nelson, S. J. and Kerner, B. and Perkins, D. J. and Lambert, C. G.},
   title = {Imputation and characterization of uncoded self-harm in major mental illness using machine learning},
   journal = {J Am Med Inform Assoc},
   volume = {27},
   number = {1},
   pages = {136-146},
   ISSN = {1067-5027 (Print)
1067-5027},
   DOI = {10.1093/jamia/ocz173},
   year = {2020},
   type = {Journal Article}
}

@article{RN198,
   author = {Su, C. C. and Chia-Cheng Lai, E. and Kao Yang, Y. H. and Man, K. K. C. and Kubota, K. and Stang, P. and Schuemie, M. and Ryan, P. and Hardy, C. and Zhang, Y. and Kimura, S. and Kamijima, Y. and Wong, I. C. K. and Setoguchi, S.},
   title = {Incidence, prevalence and prescription patterns of antipsychotic medications use in Asia and US: A cross-nation comparison with common data model},
   journal = {J Psychiatr Res},
   volume = {131},
   pages = {77-84},
   ISSN = {0022-3956},
   DOI = {10.1016/j.jpsychires.2020.08.025},
   year = {2020},
   type = {Journal Article}
}

@article{RN63,
   author = {Yu, Y. and Ruddy, K. J. and Wen, A. and Zong, N. and Tsuji, S. and Chen, J. and Shah, N. D. and Jiang, G.},
   title = {Integrating Electronic Health Record Data into the ADEpedia-on-OHDSI Platform for Improved Signal Detection: A Case Study of Immune-related Adverse Events},
   journal = {AMIA Jt Summits Transl Sci Proc},
   volume = {2020},
   pages = {710-719},
   ISSN = {2153-4063 (Print)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32477694
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233056/pdf/3269775.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN180,
   author = {Brat, G. A. and Weber, G. M. and Gehlenborg, N. and Avillach, P. and Palmer, N. P. and Chiovato, L. and Cimino, J. and Waitman, L. R. and Omenn, G. S. and Malovini, A. and Moore, J. H. and Beaulieu-Jones, B. K. and Tibollo, V. and Murphy, S. N. and Yi, S. L. and Keller, M. S. and Bellazzi, R. and Hanauer, D. A. and Serret-Larmande, A. and Gutierrez-Sacristan, A. and Holmes, J. J. and Bell, D. S. and Mandl, K. D. and Follett, R. W. and Klann, J. G. and Murad, D. A. and Scudeller, L. and Bucalo, M. and Kirchoff, K. and Craig, J. and Obeid, J. and Jouhet, V. and Griffier, R. and Cossin, S. and Moal, B. and Patel, L. P. and Bellasi, A. and Prokosch, H. U. and Kraska, D. and Sliz, P. and Tan, A. L. M. and Ngiam, K. Y. and Zambelli, A. and Mowery, D. L. and Schiver, E. and Devkota, B. and Bradford, R. L. and Daniar, M. and Daniel, C. and Benoit, V. and Bey, R. and Paris, N. and Serre, P. and Orlova, N. and Dubiel, J. and Hilka, M. and Jannot, A. S. and Breant, S. and Leblanc, J. and Griffon, N. and Burgun, A. and Bernaux, M. and Sandrin, A. and Salamanca, E. and Cormont, S. and Ganslandt, T. and Gradinger, T. and Champ, J. and Boeker, M. and Martel, P. and Esteve, L. and Gramfort, A. and Grisel, O. and Leprovost, D. and Moreau, T. and Varoquaux, G. and Vie, J. J. and Wassermann, D. and Mensch, A. and Caucheteux, C. and Haverkamp, C. and Lemaitre, G. and Bosari, S. and Krantz, I. D. and South, A. and Cai, T. and Kohane, I. S.},
   title = {International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium},
   journal = {NPJ Digit Med},
   volume = {3},
   pages = {109},
   ISSN = {2398-6352 (Electronic)
2398-6352 (Linking)},
   DOI = {10.1038/s41746-020-00308-0
308 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32864472
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7438496/pdf/41746_2020_Article_308.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN204,
   author = {Schuemie, M. J. and Ryan, P. B. and Pratt, N. and Chen, R. and You, S. C. and Krumholz, H. M. and Madigan, D. and Hripcsak, G. and Suchard, M. A.},
   title = {Large-scale evidence generation and evaluation across a network of databases (LEGEND): assessing validity using hypertension as a case study},
   journal = {J Am Med Inform Assoc},
   volume = {27},
   number = {8},
   pages = {1268-1277},
   ISSN = {1067-5027 (Print)
1067-5027},
   DOI = {10.1093/jamia/ocaa124},
   year = {2020},
   type = {Journal Article}
}

@article{RN75,
   author = {Michael, C. L. and Sholle, E. T. and Wulff, R. T. and Roboz, G. J. and Campion, T. R., Jr.},
   title = {Mapping Local Biospecimen Records to the OMOP Common Data Model},
   journal = {AMIA Jt Summits Transl Sci Proc},
   volume = {2020},
   pages = {422-429},
   ISSN = {2153-4063 (Print)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32477663
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233045/pdf/3269642.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN182,
   author = {Chandler, R. E.},
   title = {Nintedanib and ischemic colitis: Signal assessment with the integrated use of two types of real-world evidence, spontaneous reports of suspected adverse drug reactions, and observational data from large health-care databases},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {29},
   number = {8},
   pages = {951-957},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.5022},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32399991
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496543/pdf/PDS-29-951.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN16,
   author = {Zuo, X. and Li, J. and Zhao, B. and Zhou, Y. and Dong, X. and Duke, J. and Natarajan, K. and Hripcsak, G. and Shah, N. and Banda, J. M. and Reeves, R. and Miller, T. and Xu, H.},
   title = {Normalizing Clinical Document Titles to LOINC Document Ontology: an Initial Study},
   journal = {AMIA Annu Symp Proc},
   volume = {2020},
   pages = {1441-1450},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   DOI = {181_3416722 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33936520
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8075502/pdf/181_3416722.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN203,
   author = {Schuemie, M. J. and Ryan, P. B. and Pratt, N. and Chen, R. and You, S. C. and Krumholz, H. M. and Madigan, D. and Hripcsak, G. and Suchard, M. A.},
   title = {Principles of Large-scale Evidence Generation and Evaluation across a Network of Databases (LEGEND)},
   journal = {J Am Med Inform Assoc},
   volume = {27},
   number = {8},
   pages = {1331-1337},
   ISSN = {1067-5027 (Print)
1067-5027},
   DOI = {10.1093/jamia/ocaa103},
   year = {2020},
   type = {Journal Article}
}

@article{RN22,
   author = {Jeon, S. and Seo, J. and Kim, S. and Lee, J. and Kim, J. H. and Sohn, J. W. and Moon, J. and Joo, H. J.},
   title = {Proposal and Assessment of a De-Identification Strategy to Enhance Anonymity of the Observational Medical Outcomes Partnership Common Data Model (OMOP-CDM) in a Public Cloud-Computing Environment: Anonymization of Medical Data Using Privacy Models},
   journal = {J Med Internet Res},
   volume = {22},
   number = {11},
   pages = {e19597},
   ISSN = {1438-8871 (Electronic)
1438-8871 (Linking)},
   DOI = {v22i11e19597 [pii]
10.2196/19597},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33177037},
   year = {2020},
   type = {Journal Article}
}

@article{RN173,
   author = {Alnofal, F. A. and Alrwisan, A. A. and Alshammari, T. M.},
   title = {Real-world data in Saudi Arabia: Current situation and challenges for regulatory decision-making},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {29},
   number = {10},
   pages = {1303-1306},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.5025},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32458499
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pds.5025?download=true
https://onlinelibrary.wiley.com/doi/10.1002/pds.5025},
   year = {2020},
   type = {Journal Article}
}

@article{RN211,
   author = {Spotnitz, M. E. and Natarajan, K. and Ryan, P. B. and Westhoff, C. L.},
   title = {Relative Risk of Cervical Neoplasms Among Copper and Levonorgestrel-Releasing Intrauterine System Users},
   journal = {Obstet Gynecol},
   volume = {135},
   number = {2},
   pages = {319-327},
   ISSN = {0029-7844 (Print)
0029-7844},
   DOI = {10.1097/aog.0000000000003656},
   year = {2020},
   type = {Journal Article}
}

@article{RN196,
   author = {Callahan, A. and Shah, N. H. and Chen, J. H.},
   title = {Research and Reporting Considerations for Observational Studies Using Electronic Health Record Data},
   journal = {Ann Intern Med},
   volume = {172},
   number = {11 Suppl},
   pages = {S79-s84},
   ISSN = {0003-4819 (Print)
0003-4819},
   DOI = {10.7326/m19-0873},
   year = {2020},
   type = {Journal Article}
}

@article{RN76,
   author = {Lane, J. C. E. and Weaver, J. and Kostka, K. and Duarte-Salles, T. and Abrahao, M. T. F. and Alghoul, H. and Alser, O. and Alshammari, T. M. and Areia, C. and Biedermann, P. and Banda, J. M. and Burn, E. and Casajust, P. and Fister, K. and Hardin, J. and Hester, L. and Hripcsak, G. and Kaas-Hansen, B. S. and Khosla, S. and Kolovos, S. and Lynch, K. E. and Makadia, R. and Mehta, P. P. and Morales, D. R. and Morgan-Stewart, H. and Mosseveld, M. and Newby, D. and Nyberg, F. and Ostropolets, A. and Woong Park, R. and Prats-Uribe, A. and Rao, G. A. and Reich, C. and Rijnbeek, P. and Sena, A. G. and Shoaibi, A. and Spotnitz, M. and Vignesh, S. and Suchard, M. A. and Vizcaya, D. and Wen, H. and de Wilde, M. and Xie, J. and You, S. C. and Zhang, L. and Lovestone, S. and Ryan, P. and Prieto-Alhambra, D. and consortium, Ohdsi-Covid-},
   title = {Risk of depression, suicide and psychosis with hydroxychloroquine treatment for rheumatoid arthritis: a multinational network cohort study},
   journal = {Rheumatology (Oxford)},
   ISSN = {1462-0332 (Electronic)
1462-0324 (Linking)},
   DOI = {6048420 [pii]
10.1093/rheumatology/keaa771},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33367863
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7798671/pdf/keaa771.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN74,
   author = {Lane, J. C. E. and Weaver, J. and Kostka, K. and Duarte-Salles, T. and Abrahao, M. T. F. and Alghoul, H. and Alser, O. and Alshammari, T. M. and Biedermann, P. and Banda, J. M. and Burn, E. and Casajust, P. and Conover, M. M. and Culhane, A. C. and Davydov, A. and DuVall, S. L. and Dymshyts, D. and Fernandez-Bertolin, S. and Fister, K. and Hardin, J. and Hester, L. and Hripcsak, G. and Kaas-Hansen, B. S. and Kent, S. and Khosla, S. and Kolovos, S. and Lambert, C. G. and van der Lei, J. and Lynch, K. E. and Makadia, R. and Margulis, A. V. and Matheny, M. E. and Mehta, P. and Morales, D. R. and Morgan-Stewart, H. and Mosseveld, M. and Newby, D. and Nyberg, F. and Ostropolets, A. and Park, R. W. and Prats-Uribe, A. and Rao, G. A. and Reich, C. and Reps, J. and Rijnbeek, P. and Sathappan, S. M. K. and Schuemie, M. and Seager, S. and Sena, A. G. and Shoaibi, A. and Spotnitz, M. and Suchard, M. A. and Torre, C. O. and Vizcaya, D. and Wen, H. and de Wilde, M. and Xie, J. and You, S. C. and Zhang, L. and Zhuk, O. and Ryan, P. and Prieto-Alhambra, D. and consortium, Ohdsi-Covid-},
   title = {Risk of hydroxychloroquine alone and in combination with azithromycin in the treatment of rheumatoid arthritis: a multinational, retrospective study},
   journal = {Lancet Rheumatol},
   volume = {2},
   number = {11},
   pages = {e698-e711},
   ISSN = {2665-9913 (Electronic)
2665-9913 (Linking)},
   DOI = {10.1016/S2665-9913(20)30276-9
S2665-9913(20)30276-9 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32864627
https://www.thelancet.com/pdfs/journals/lanrhe/PIIS2665-9913(20)30276-9.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN67,
   author = {Tong, J. and Duan, R. and Li, R. and Scheuemie, M. J. and Moore, J. H. and Chen, Y.},
   title = {Robust-ODAL: Learning from heterogeneous health systems without sharing patient-level data},
   journal = {Pac Symp Biocomput},
   volume = {25},
   pages = {695-706},
   ISSN = {2335-6936 (Electronic)
2335-6928 (Linking)},
   DOI = {9789811215636_0061 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31797639
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6905508/pdf/nihms-1061510.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN81,
   author = {Gruhl, M. and Reinecke, I. and Sedlmayr, M.},
   title = {Specification and Distribution of Vocabularies Among Consortial Partners},
   journal = {Stud Health Technol Inform},
   volume = {270},
   pages = {1393-1394},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI200458 [pii]
10.3233/SHTI200458},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32570675
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI200458},
   year = {2020},
   type = {Journal Article}
}

@article{RN206,
   author = {Averitt, A. J. and Vanitchanant, N. and Ranganath, R. and Perotte, A. J.},
   title = {The Counterfactual χ-GAN: Finding comparable cohorts in observational health data},
   journal = {J Biomed Inform},
   volume = {109},
   pages = {103515},
   ISSN = {1532-0464},
   DOI = {10.1016/j.jbi.2020.103515},
   year = {2020},
   type = {Journal Article}
}

@article{RN193,
   author = {Lovestone, S.},
   title = {The European medical information framework: A novel ecosystem for sharing healthcare data across Europe},
   journal = {Learn Health Syst},
   volume = {4},
   number = {2},
   pages = {e10214},
   ISSN = {2379-6146},
   DOI = {10.1002/lrh2.10214},
   year = {2020},
   type = {Journal Article}
}

@article{RN68,
   author = {Syed, S. and Baghal, A. and Prior, F. and Zozus, M. and Al-Shukri, S. and Syeda, H. B. and Garza, M. and Begum, S. and Gates, K. and Syed, M. and Sexton, K. W.},
   title = {Toolkit to Compute Time-Based Elixhauser Comorbidity Indices and Extension to Common Data Models},
   journal = {Healthc Inform Res},
   volume = {26},
   number = {3},
   pages = {193-200},
   ISSN = {2093-3681 (Print)
2093-3681 (Linking)},
   DOI = {hir.2020.26.3.193 [pii]
10.4258/hir.2020.26.3.193},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32819037
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7438698/pdf/hir-26-3-193.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN178,
   author = {Brandt, P. S. and Kiefer, R. C. and Pacheco, J. A. and Adekkanattu, P. and Sholle, E. T. and Ahmad, F. S. and Xu, J. and Xu, Z. and Ancker, J. S. and Wang, F. and Luo, Y. and Jiang, G. and Pathak, J. and Rasmussen, L. V.},
   title = {Toward cross-platform electronic health record-driven phenotyping using Clinical Quality Language},
   journal = {Learn Health Syst},
   volume = {4},
   number = {4},
   pages = {e10233},
   ISSN = {2379-6146 (Electronic)
2379-6146 (Linking)},
   DOI = {10.1002/lrh2.10233
LRH210233 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33083538
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7556419/pdf/LRH2-4-e10233.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN18,
   author = {Ryu, B. and Yoon, E. and Kim, S. and Lee, S. and Baek, H. and Yi, S. and Na, H. Y. and Kim, J. W. and Baek, R. M. and Hwang, H. and Yoo, S.},
   title = {Transformation of Pathology Reports Into the Common Data Model With Oncology Module: Use Case for Colon Cancer},
   journal = {J Med Internet Res},
   volume = {22},
   number = {12},
   pages = {e18526},
   ISSN = {1438-8871 (Electronic)
1438-8871 (Linking)},
   DOI = {v22i12e18526 [pii]
10.2196/18526},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33295294},
   year = {2020},
   type = {Journal Article}
}

@article{RN77,
   author = {Lamer, A. and Depas, N. and Doutreligne, M. and Parrot, A. and Verloop, D. and Defebvre, M. M. and Ficheur, G. and Chazard, E. and Beuscart, J. B.},
   title = {Transforming French Electronic Health Records into the Observational Medical Outcome Partnership's Common Data Model: A Feasibility Study},
   journal = {Appl Clin Inform},
   volume = {11},
   number = {1},
   pages = {13-22},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0039-3402754},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31914471
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6949163/pdf/10-1055-s-0039-3402754.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN194,
   author = {Averitt, A. J. and Weng, C. and Ryan, P. and Perotte, A.},
   title = {Translating evidence into practice: eligibility criteria fail to eliminate clinically significant differences between real-world and study populations},
   journal = {NPJ Digit Med},
   volume = {3},
   pages = {67},
   ISSN = {2398-6352},
   DOI = {10.1038/s41746-020-0277-8},
   year = {2020},
   type = {Journal Article}
}

@article{RN201,
   author = {Chen, R. and Ryan, P. and Natarajan, K. and Falconer, T. and Crew, K. D. and Reich, C. G. and Vashisht, R. and Randhawa, G. and Shah, N. H. and Hripcsak, G.},
   title = {Treatment Patterns for Chronic Comorbid Conditions in Patients With Cancer Using a Large-Scale Observational Data Network},
   journal = {JCO Clin Cancer Inform},
   volume = {4},
   pages = {171-183},
   ISSN = {2473-4276},
   DOI = {10.1200/cci.19.00107},
   year = {2020},
   type = {Journal Article}
}

@article{RN176,
   author = {Burn, E. and Sena, A. G. and Prats-Uribe, A. and Spotnitz, M. and DuVall, S. and Lynch, K. E. and Matheny, M. E. and Nyberg, F. and Ahmed, W. U. and Alser, O. and Alghoul, H. and Alshammari, T. and Zhang, L. and Casajust, P. and Areia, C. and Shah, K. and Reich, C. and Blacketer, C. and Andryc, A. and Fortin, S. and Natarajan, K. and Gong, M. and Golozar, A. and Morales, D. and Rijnbeek, P. and Subbian, V. and Roel, E. and Recalde, M. and Lane, J. C. E. and Vizcaya, D. and Posada, J. D. and Shah, N. H. and Jonnagaddala, J. and Hui Lai, L. Y. and Aviles-Jurado, F. X. and Hripcsak, G. and Suchard, M. A. and Ranzani, O. T. and Ryan, P. and Prieto-Alhambra, D. and Kostka, K. and Duarte-Salles, T.},
   title = {Use of dialysis, tracheostomy, and extracorporeal membrane oxygenation among 240,392 patients hospitalized with COVID-19 in the United States},
   journal = {medRxiv},
   DOI = {10.1101/2020.11.25.20229088},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/33269356
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7709172/pdf/nihpp-2020.11.25.20229088.pdf},
   year = {2020},
   type = {Journal Article}
}

@article{RN87,
   author = {Rogers, J. R. and Callahan, T. J. and Kang, T. and Bauck, A. and Khare, R. and Brown, J. S. and Kahn, M. G. and Weng, C.},
   title = {A Data Element-Function Conceptual Model for Data Quality Checks},
   journal = {EGEMS (Wash DC)},
   volume = {7},
   number = {1},
   pages = {17},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.5334/egems.289},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31065558
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6484368/pdf/egems-7-1-289.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN172,
   author = {Yu, Y. and Ruddy, K. J. and Hong, N. and Tsuji, S. and Wen, A. and Shah, N. D. and Jiang, G.},
   title = {ADEpedia-on-OHDSI: A next generation pharmacovigilance signal detection platform using the OHDSI common data model},
   journal = {J Biomed Inform},
   volume = {91},
   pages = {103119},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30037-1 [pii]
10.1016/j.jbi.2019.103119},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30738946
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6432939/pdf/nihms-1521934.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN202,
   author = {Schuemie, M. J. and Ryan, P. B. and Man, K. K. C. and Wong, I. C. K. and Suchard, M. A. and Hripcsak, G.},
   title = {A plea to stop using the case-control design in retrospective database studies},
   journal = {Stat Med},
   volume = {38},
   number = {22},
   pages = {4199-4208},
   ISSN = {0277-6715 (Print)
0277-6715},
   DOI = {10.1002/sim.8215},
   year = {2019},
   type = {Journal Article}
}

@article{RN93,
   author = {Jiang, G. and Yu, Y. and Kingsbury, P. R. and Shah, N.},
   title = {Augmenting Medical Device Evaluation Using a Reusable Unique Device Identifier Interoperability Solution Based on the OHDSI Common Data Model},
   journal = {Stud Health Technol Inform},
   volume = {264},
   pages = {1502-1503},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI190505 [pii]
10.3233/SHTI190505},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31438202
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI190505},
   year = {2019},
   type = {Journal Article}
}

@article{RN89,
   author = {Meystre, S. M. and Heider, P. M. and Kim, Y. and Aruch, D. B. and Britten, C. D.},
   title = {Automatic trial eligibility surveillance based on unstructured clinical data},
   journal = {Int J Med Inform},
   volume = {129},
   pages = {13-19},
   ISSN = {1872-8243 (Electronic)
1386-5056 (Linking)},
   DOI = {S1386-5056(18)31052-9 [pii]
10.1016/j.ijmedinf.2019.05.018},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31445247
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6717538/pdf/nihms-1530600.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN188,
   author = {Viernes, B. and Lynch, K. E. and South, B. and Coronado, G. and DuVall, S. L.},
   title = {Characterizing VA Users with the OMOP Common Data Model},
   journal = {Stud Health Technol Inform},
   volume = {264},
   pages = {1614-1615},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI190561 [pii]
10.3233/SHTI190561},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31438258
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI190561},
   year = {2019},
   type = {Journal Article}
}

@article{RN214,
   author = {Schuemie, M. J. and Madigan, D. and Ryan, P. B. and Reich, C. and Suchard, M. A. and Berlin, J. A. and Hripcsak, G.},
   title = {Comment on "How pharmacoepidemiology networks can manage distributed analyses to improve replicability and transparency and minimize bias"},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {28},
   number = {7},
   pages = {1032-1033},
   ISSN = {1053-8569},
   DOI = {10.1002/pds.4798},
   year = {2019},
   type = {Journal Article}
}

@article{RN96,
   author = {Guo, G. N. and Jonnagaddala, J. and Farshid, S. and Huser, V. and Reich, C. and Liaw, S. T.},
   title = {Comparison of the cohort selection performance of Australian Medicines Terminology to Anatomical Therapeutic Chemical mappings},
   journal = {J Am Med Inform Assoc},
   volume = {26},
   number = {11},
   pages = {1237-1246},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5572827 [pii]
10.1093/jamia/ocz143},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31545380
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7647230/pdf/ocz143.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN207,
   author = {Suchard, M. A. and Schuemie, M. J. and Krumholz, H. M. and You, S. C. and Chen, R. and Pratt, N. and Reich, C. G. and Duke, J. and Madigan, D. and Hripcsak, G. and Ryan, P. B.},
   title = {Comprehensive comparative effectiveness and safety of first-line antihypertensive drug classes: a systematic, multinational, large-scale analysis},
   journal = {Lancet},
   volume = {394},
   number = {10211},
   pages = {1816-1826},
   ISSN = {0140-6736 (Print)
0140-6736},
   DOI = {10.1016/s0140-6736(19)32317-7},
   year = {2019},
   type = {Journal Article}
}

@article{RN171,
   author = {Rasmussen, L. V. and Brandt, P. S. and Jiang, G. and Kiefer, R. C. and Pacheco, J. A. and Adekkanattu, P. and Ancker, J. S. and Wang, F. and Xu, Z. and Pathak, J. and Luo, Y.},
   title = {Considerations for Improving the Portability of Electronic Health Record-Based Phenotype Algorithms},
   journal = {AMIA Annu Symp Proc},
   volume = {2019},
   pages = {755-764},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32308871
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7153055/pdf/3202804.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN183,
   author = {Yuan, C. and Ryan, P. B. and Ta, C. and Guo, Y. and Li, Z. and Hardin, J. and Makadia, R. and Jin, P. and Shang, N. and Kang, T. and Weng, C.},
   title = {Criteria2Query: a natural language interface to clinical databases for cohort definition},
   journal = {J Am Med Inform Assoc},
   volume = {26},
   number = {4},
   pages = {294-305},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5308980 [pii]
10.1093/jamia/ocy178},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30753493
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6402359/pdf/ocy178.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN92,
   author = {Klann, J. G. and Joss, M. A. H. and Embree, K. and Murphy, S. N.},
   title = {Data model harmonization for the All Of Us Research Program: Transforming i2b2 data into the OMOP common data model},
   journal = {PLoS One},
   volume = {14},
   number = {2},
   pages = {e0212463},
   ISSN = {1932-6203 (Electronic)
1932-6203 (Linking)},
   DOI = {10.1371/journal.pone.0212463
PONE-D-18-34751 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30779778
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6380544/pdf/pone.0212463.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN146,
   author = {Sharma, H. and Mao, C. and Zhang, Y. and Vatani, H. and Yao, L. and Zhong, Y. and Rasmussen, L. and Jiang, G. and Pathak, J. and Luo, Y.},
   title = {Developing a portable natural language processing based phenotyping system},
   journal = {BMC Med Inform Decis Mak},
   volume = {19},
   number = {Suppl 3},
   pages = {78},
   ISSN = {1472-6947 (Electronic)
1472-6947 (Linking)},
   DOI = {10.1186/s12911-019-0786-z
10.1186/s12911-019-0786-z [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30943974
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6448187/pdf/12911_2019_Article_786.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN213,
   author = {Wang, L. and Voss, E. A. and Weaver, J. and Hester, L. and Yuan, Z. and DeFalco, F. and Schuemie, M. J. and Ryan, P. B. and Sun, D. and Freedman, A. and Alba, M. and Lind, J. and Meininger, G. and Berlin, J. A. and Rosenthal, N.},
   title = {Diabetic ketoacidosis in patients with type 2 diabetes treated with sodium glucose co-transporter 2 inhibitors versus other antihyperglycemic agents: An observational study of four US administrative claims databases},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {28},
   number = {12},
   pages = {1620-1628},
   ISSN = {1053-8569 (Print)
1053-8569},
   DOI = {10.1002/pds.4887},
   year = {2019},
   type = {Journal Article}
}

@article{RN95,
   author = {Hripcsak, G. and Shang, N. and Peissig, P. L. and Rasmussen, L. V. and Liu, C. and Benoit, B. and Carroll, R. J. and Carrell, D. S. and Denny, J. C. and Dikilitas, O. and Gainer, V. S. and Howell, K. M. and Klann, J. G. and Kullo, I. J. and Lingren, T. and Mentch, F. D. and Murphy, S. N. and Natarajan, K. and Pacheco, J. A. and Wei, W. Q. and Wiley, K. and Weng, C.},
   title = {Facilitating phenotype transfer using a common data model},
   journal = {J Biomed Inform},
   volume = {96},
   pages = {103253},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30172-8 [pii]
10.1016/j.jbi.2019.103253},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31325501
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697565/pdf/nihms-1535478.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN102,
   author = {Haberson, A. and Rinner, C. and Schoberl, A. and Gall, W.},
   title = {Feasibility of Mapping Austrian Health Claims Data to the OMOP Common Data Model},
   journal = {J Med Syst},
   volume = {43},
   number = {10},
   pages = {314},
   ISSN = {1573-689X (Electronic)
0148-5598 (Linking)},
   DOI = {10.1007/s10916-019-1436-9
10.1007/s10916-019-1436-9 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31494719
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6732152/pdf/10916_2019_Article_1436.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN104,
   author = {Bartlett, V. L. and Dhruva, S. S. and Shah, N. D. and Ryan, P. and Ross, J. S.},
   title = {Feasibility of Using Real-World Data to Replicate Clinical Trial Evidence},
   journal = {JAMA Netw Open},
   volume = {2},
   number = {10},
   pages = {e1912869},
   ISSN = {2574-3805 (Electronic)
2574-3805 (Linking)},
   DOI = {2752575 [pii]
10.1001/jamanetworkopen.2019.12869},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31596493
https://jamanetwork.com/journals/jamanetworkopen/articlepdf/2752575/bartlett_2019_oi_190494.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN105,
   author = {Banda, J. M.},
   title = {Fully connecting the Observational Health Data Science and Informatics (OHDSI) initiative with the world of linked open data},
   journal = {Genomics Inform},
   volume = {17},
   number = {2},
   pages = {e13},
   ISSN = {1598-866X (Print)
1598-866X (Linking)},
   DOI = {GI.2019.17.2.e13 [pii]
10.5808/GI.2019.17.2.e13},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31307128
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808628/pdf/gi-2019-17-2-e13.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN85,
   author = {Shin, S. J. and You, S. C. and Roh, J. and Park, Y. R. and Park, R. W.},
   title = {Genomic Common Data Model for Biomedical Data in Clinical Practice},
   journal = {Stud Health Technol Inform},
   volume = {264},
   pages = {1843-1844},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI190676 [pii]
10.3233/SHTI190676},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31438371
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI190676},
   year = {2019},
   type = {Journal Article}
}

@article{RN6,
   author = {Shin, S. J. and You, S. C. and Park, Y. R. and Roh, J. and Kim, J. H. and Haam, S. and Reich, C. G. and Blacketer, C. and Son, D. S. and Oh, S. and Park, R. W.},
   title = {Genomic Common Data Model for Seamless Interoperation of Biomedical Data in Clinical Practice: Retrospective Study},
   journal = {J Med Internet Res},
   volume = {21},
   number = {3},
   pages = {e13249},
   ISSN = {1438-8871 (Electronic)
1438-8871 (Linking)},
   DOI = {v21i3e13249 [pii]
10.2196/13249},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30912749},
   year = {2019},
   type = {Journal Article}
}

@article{RN186,
   author = {Warner, J. L. and Dymshyts, D. and Reich, C. G. and Gurley, M. J. and Hochheiser, H. and Moldwin, Z. H. and Belenkaya, R. and Williams, A. E. and Yang, P. C.},
   title = {HemOnc: A new standard vocabulary for chemotherapy regimen representation in the OMOP common data model},
   journal = {J Biomed Inform},
   volume = {96},
   pages = {103239},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30158-3 [pii]
10.1016/j.jbi.2019.103239},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31238109
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697579/pdf/nihms-1534326.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN184,
   author = {Reps, J. M. and Rijnbeek, P. R. and Ryan, P. B.},
   title = {Identifying the DEAD: Development and Validation of a Patient-Level Model to Predict Death Status in Population-Level Claims Data},
   journal = {Drug Saf},
   volume = {42},
   number = {11},
   pages = {1377-1386},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-019-00827-0
10.1007/s40264-019-00827-0 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31054141
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6834730/pdf/40264_2019_Article_827.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN195,
   author = {Lynch, K. E. and Deppen, S. A. and DuVall, S. L. and Viernes, B. and Cao, A. and Park, D. and Hanchrow, E. and Hewa, K. and Greaves, P. and Matheny, M. E.},
   title = {Incrementally Transforming Electronic Medical Records into the Observational Medical Outcomes Partnership Common Data Model: A Multidimensional Quality Assurance Approach},
   journal = {Appl Clin Inform},
   volume = {10},
   number = {5},
   pages = {794-803},
   ISSN = {1869-0327},
   DOI = {10.1055/s-0039-1697598},
   year = {2019},
   type = {Journal Article}
}

@article{RN91,
   author = {Lynch, K. E. and Deppen, S. A. and DuVall, S. L. and Viernes, B. and Cao, A. and Park, D. and Hanchrow, E. and Hewa, K. and Greaves, P. and Matheny, M. E.},
   title = {Incrementally Transforming Electronic Medical Records into the Observational Medical Outcomes Partnership Common Data Model: A Multidimensional Quality Assurance Approach},
   journal = {Appl Clin Inform},
   volume = {10},
   number = {5},
   pages = {794-803},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0039-1697598},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31645076
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6811349/pdf/10-1055-s-0039-1697598.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN97,
   author = {Gruendner, J. and Schwachhofer, T. and Sippl, P. and Wolf, N. and Erpenbeck, M. and Gulden, C. and Kapsner, L. A. and Zierk, J. and Mate, S. and Sturzl, M. and Croner, R. and Prokosch, H. U. and Toddenroth, D.},
   title = {KETOS: Clinical decision support and machine learning as a service - A training and deployment platform based on Docker, OMOP-CDM, and FHIR Web Services},
   journal = {PLoS One},
   volume = {14},
   number = {10},
   pages = {e0223010},
   ISSN = {1932-6203 (Electronic)
1932-6203 (Linking)},
   DOI = {10.1371/journal.pone.0223010
PONE-D-19-12555 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31581246
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6776354/pdf/pone.0223010.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN185,
   author = {Weeks, J. and Pardee, R.},
   title = {Learning to Share Health Care Data: A Brief Timeline of Influential Common Data Models and Distributed Health Data Networks in U.S. Health Care Research},
   journal = {EGEMS (Wash DC)},
   volume = {7},
   number = {1},
   pages = {4},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.5334/egems.279},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30937326
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437693/pdf/egems-7-1-279.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN86,
   author = {Shang, N. and Liu, C. and Rasmussen, L. V. and Ta, C. N. and Caroll, R. J. and Benoit, B. and Lingren, T. and Dikilitas, O. and Mentch, F. D. and Carrell, D. S. and Wei, W. Q. and Luo, Y. and Gainer, V. S. and Kullo, I. J. and Pacheco, J. A. and Hakonarson, H. and Walunas, T. L. and Denny, J. C. and Wiley, K. and Murphy, S. N. and Hripcsak, G. and Weng, C.},
   title = {Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network},
   journal = {J Biomed Inform},
   volume = {99},
   pages = {103293},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30212-6 [pii]
10.1016/j.jbi.2019.103293},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31542521
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6894517/pdf/nihms-1544840.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN210,
   author = {Burn, Edward and Weaver, James and Morales, Daniel and Prats-Uribe, Albert and Delmestri, Antonella and Strauss, Victoria Y. and He, Ying and Robinson, Danielle E. and Pinedo-Villanueva, Rafael and Kolovos, Spyros and Duarte-Salles, Talita and Sproviero, William and Yu, Dahai and Van Speybroeck, Michel and Williams, Ross and John, Luis H. and Hughes, Nigel and Sena, Anthony G. and Costello, Ruth and Birlie, Belay and Culliford, David and O'Leary, Caroline and Morgan, Henry and Burkard, Theresa and Prieto-Alhambra, Daniel and Ryan, Patrick},
   title = {Opioid use, postoperative complications, and implant survival after unicompartmental versus total knee replacement: a population-based network study},
   journal = {The Lancet Rheumatology},
   volume = {1},
   number = {4},
   pages = {e229-e236},
   ISSN = {2665-9913},
   DOI = {https://doi.org/10.1016/S2665-9913(19)30075-X},
   url = {https://www.sciencedirect.com/science/article/pii/S266599131930075X},
   year = {2019},
   type = {Journal Article}
}

@article{RN94,
   author = {Kwong, M. and Gardner, H. L. and Dieterle, N. and Rentko, V.},
   title = {Optimization of Electronic Medical Records for Data Mining Using a Common Data Model},
   journal = {Top Companion Anim Med},
   volume = {37},
   pages = {100364},
   ISSN = {1946-9837 (Electronic)
1946-9837 (Linking)},
   DOI = {S1938-9736(19)30101-1 [pii]
10.1016/j.tcam.2019.100364},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31837755
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7874511/pdf/nihms-1554946.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN99,
   author = {Glicksberg, B. S. and Oskotsky, B. and Thangaraj, P. M. and Giangreco, N. and Badgeley, M. A. and Johnson, K. W. and Datta, D. and Rudrapatna, V. A. and Rappoport, N. and Shervey, M. M. and Miotto, R. and Goldstein, T. C. and Rutenberg, E. and Frazier, R. and Lee, N. and Israni, S. and Larsen, R. and Percha, B. and Li, L. and Dudley, J. T. and Tatonetti, N. P. and Butte, A. J.},
   title = {PatientExploreR: an extensible application for dynamic visualization of patient clinical history from electronic health records in the OMOP common data model},
   journal = {Bioinformatics},
   volume = {35},
   number = {21},
   pages = {4515-4518},
   ISSN = {1367-4811 (Electronic)
1367-4803 (Linking)},
   DOI = {5520433 [pii]
10.1093/bioinformatics/btz409},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31214700
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821222/pdf/btz409.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN187,
   author = {Swerdel, J. N. and Hripcsak, G. and Ryan, P. B.},
   title = {PheValuator: Development and evaluation of a phenotype algorithm evaluator},
   journal = {J Biomed Inform},
   volume = {97},
   pages = {103258},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30177-7 [pii]
10.1016/j.jbi.2019.103258},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31369862
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7736922/pdf/nihms-1651855.pdf},
   year = {2019},
   type = {Journal Article}
}

@article{RN100,
   author = {Glicksberg, B. S. and Oskotsky, B. and Giangreco, N. and Thangaraj, P. M. and Rudrapatna, V. and Datta, D. and Frazier, R. and Lee, N. and Larsen, R. and Tatonetti, N. P. and Butte, A. J.},
   title = {ROMOP: a light-weight R package for interfacing with OMOP-formatted electronic health record data},
   journal = {JAMIA Open},
   volume = {2},
   number = {1},
   pages = {10-14},
   ISSN = {2574-2531 (Electronic)
2574-2531 (Linking)},
   DOI = {10.1093/jamiaopen/ooy059},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31633087
https://escholarship.org/content/qt8g8590sc/qt8g8590sc.pdf?t=qag2bd},
   year = {2019},
   type = {Journal Article}
}

@article{RN103,
   author = {Belenkaya, R. and Gurley, M. and Dymshyts, D. and Araujo, S. and Williams, A. and Chen, R. and Reich, C.},
   title = {Standardized Observational Cancer Research Using the OMOP CDM Oncology Module},
   journal = {Stud Health Technol Inform},
   volume = {264},
   pages = {1831-1832},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI190670 [pii]
10.3233/SHTI190670},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31438365
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI190670},
   year = {2019},
   type = {Journal Article}
}

@article{RN1,
   author = {Haberson, A. and Rinner, C. and Gall, W.},
   title = {Standardizing Austrians Claims Data Using the OMOP Common Data Model: A Feasibility Study},
   journal = {Stud Health Technol Inform},
   volume = {258},
   pages = {151-152},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30942734},
   year = {2019},
   type = {Journal Article}
}

@article{RN177,
   author = {Reps, J. M. and Rijnbeek, P. R. and Ryan, P. B.},
   title = {Supplementing claims data analysis using self-reported data to develop a probabilistic phenotype model for current smoking status},
   journal = {J Biomed Inform},
   volume = {97},
   pages = {103264},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(19)30183-2 [pii]
10.1016/j.jbi.2019.103264},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31386904},
   year = {2019},
   type = {Journal Article}
}

@article{RN90,
   author = {Lima, D. M. and Rodrigues-Jr, J. F. and Traina, A. J. M. and Pires, F. A. and Gutierrez, M. A.},
   title = {Transforming Two Decades of ePR Data to OMOP CDM for Clinical Research},
   journal = {Stud Health Technol Inform},
   volume = {264},
   pages = {233-237},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   DOI = {SHTI190218 [pii]
10.3233/SHTI190218},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/31437920
https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI190218},
   year = {2019},
   type = {Journal Article}
}

@article{RN110,
   author = {Rinner, C. and Gezgin, D. and Wendl, C. and Gall, W.},
   title = {A Clinical Data Warehouse Based on OMOP and i2b2 for Austrian Health Claims Data},
   journal = {Stud Health Technol Inform},
   volume = {248},
   pages = {94-99},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29726424
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-858-7-94},
   year = {2018},
   type = {Journal Article}
}

@article{RN106,
   author = {Zhang, X. and Wang, L. and Miao, S. and Xu, H. and Yin, Y. and Zhu, Y. and Dai, Z. and Shan, T. and Jing, S. and Wang, J. and Zhang, X. and Huang, Z. and Wang, Z. and Guo, J. and Liu, Y.},
   title = {Analysis of treatment pathways for three chronic diseases using OMOP CDM},
   journal = {J Med Syst},
   volume = {42},
   number = {12},
   pages = {260},
   ISSN = {1573-689X (Electronic)
0148-5598 (Linking)},
   DOI = {10.1007/s10916-018-1076-5
10.1007/s10916-018-1076-5 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30421323
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6244882/pdf/10916_2018_Article_1076.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN142,
   author = {Pacaci, A. and Gonul, S. and Sinaci, A. A. and Yuksel, M. and Laleci Erturkmen, G. B.},
   title = {A Semantic Transformation Methodology for the Secondary Use of Observational Healthcare Data in Postmarketing Safety Studies},
   journal = {Front Pharmacol},
   volume = {9},
   pages = {435},
   ISSN = {1663-9812 (Print)
1663-9812 (Linking)},
   DOI = {10.3389/fphar.2018.00435},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29760661
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5937227/pdf/fphar-09-00435.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN108,
   author = {Vashisht, R. and Jung, K. and Schuler, A. and Banda, J. M. and Park, R. W. and Jin, S. and Li, L. and Dudley, J. T. and Johnson, K. W. and Shervey, M. M. and Xu, H. and Wu, Y. and Natrajan, K. and Hripcsak, G. and Jin, P. and Van Zandt, M. and Reckard, A. and Reich, C. G. and Weaver, J. and Schuemie, M. J. and Ryan, P. B. and Callahan, A. and Shah, N. H.},
   title = {Association of Hemoglobin A1c Levels With Use of Sulfonylureas, Dipeptidyl Peptidase 4 Inhibitors, and Thiazolidinediones in Patients With Type 2 Diabetes Treated With Metformin: Analysis From the Observational Health Data Sciences and Informatics Initiative},
   journal = {JAMA Netw Open},
   volume = {1},
   number = {4},
   pages = {e181755},
   ISSN = {2574-3805 (Electronic)
2574-3805 (Linking)},
   DOI = {2698083 [pii]
10.1001/jamanetworkopen.2018.1755},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30646124
https://jamanetwork.com/journals/jamanetworkopen/articlepdf/2698083/vashisht_2018_oi_180106.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN121,
   author = {Elkin, P. L. and Mullin, S. and Sakilay, S.},
   title = {Biomedical Informatics Investigator},
   journal = {Stud Health Technol Inform},
   volume = {255},
   pages = {195-199},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30306935
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-921-8-195},
   year = {2018},
   type = {Journal Article}
}

@article{RN107,
   author = {Ta, C. N. and Dumontier, M. and Hripcsak, G. and Tatonetti, N. P. and Weng, C.},
   title = {Columbia Open Health Data, clinical concept prevalence and co-occurrence from electronic health records},
   journal = {Sci Data},
   volume = {5},
   pages = {180273},
   ISSN = {2052-4463 (Electronic)
2052-4463 (Linking)},
   DOI = {sdata2018273 [pii]
10.1038/sdata.2018.273},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30480666
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6257042/pdf/sdata2018273.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN116,
   author = {Liyanage, H. and Liaw, S. T. and Jonnagaddala, J. and Hinton, W. and de Lusignan, S.},
   title = {Common Data Models (CDMs) to Enhance International Big Data Analytics: A Diabetes Use Case to Compare Three CDMs},
   journal = {Stud Health Technol Inform},
   volume = {255},
   pages = {60-64},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30306907
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-921-8-60},
   year = {2018},
   type = {Journal Article}
}

@article{RN114,
   author = {Polubriaginof, F. C. G. and Vanguri, R. and Quinnies, K. and Belbin, G. M. and Yahi, A. and Salmasian, H. and Lorberbaum, T. and Nwankwo, V. and Li, L. and Shervey, M. M. and Glowe, P. and Ionita-Laza, I. and Simmerling, M. and Hripcsak, G. and Bakken, S. and Goldstein, D. and Kiryluk, K. and Kenny, E. E. and Dudley, J. and Vawdrey, D. K. and Tatonetti, N. P.},
   title = {Disease Heritability Inferred from Familial Relationships Reported in Medical Records},
   journal = {Cell},
   volume = {173},
   number = {7},
   pages = {1692-1704 e11},
   ISSN = {1097-4172 (Electronic)
0092-8674 (Linking)},
   DOI = {S0092-8674(18)30525-7 [pii]
10.1016/j.cell.2018.04.032},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29779949
https://www.cell.com/cell/pdf/S0092-8674(18)30525-7.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN122,
   author = {Hripcsak, G. and Levine, M. E. and Shang, N. and Ryan, P. B.},
   title = {Effect of vocabulary mapping for conditions on phenotype cohorts},
   journal = {J Am Med Inform Assoc},
   volume = {25},
   number = {12},
   pages = {1618-1625},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5159502 [pii]
10.1093/jamia/ocy124},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30395248
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289550/pdf/ocy124.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN113,
   author = {Schuemie, M. J. and Hripcsak, G. and Ryan, P. B. and Madigan, D. and Suchard, M. A.},
   title = {Empirical confidence interval calibration for population-level effect estimation studies in observational healthcare data},
   journal = {Proc Natl Acad Sci U S A},
   volume = {115},
   number = {11},
   pages = {2571-2577},
   ISSN = {1091-6490 (Electronic)
0027-8424 (Linking)},
   DOI = {1708282114 [pii]
10.1073/pnas.1708282114},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29531023
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5856503/pdf/pnas.201708282.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN27,
   author = {Yang, Y. and Zhou, X. and Gao, S. and Lin, H. and Xie, Y. and Feng, Y. and Huang, K. and Zhan, S.},
   title = {Evaluation of Electronic Healthcare Databases for Post-Marketing Drug Safety Surveillance and Pharmacoepidemiology in China},
   journal = {Drug Saf},
   volume = {41},
   number = {1},
   pages = {125-137},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-017-0589-z
10.1007/s40264-017-0589-z [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28815480
https://link.springer.com/content/pdf/10.1007/s40264-017-0589-z.pdf
https://link.springer.com/article/10.1007/s40264-017-0589-z},
   year = {2018},
   type = {Journal Article}
}

@article{RN111,
   author = {Seneviratne, M. G. and Banda, J. M. and Brooks, J. D. and Shah, N. H. and Hernandez-Boussard, T. M.},
   title = {Identifying Cases of Metastatic Prostate Cancer Using Machine Learning on Electronic Health Records},
   journal = {AMIA Annu Symp Proc},
   volume = {2018},
   pages = {1498-1504},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30815195
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371284/pdf/2975482.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN109,
   author = {Schuemie, M. J. and Ryan, P. B. and Hripcsak, G. and Madigan, D. and Suchard, M. A.},
   title = {Improving reproducibility by using high-throughput observational studies with empirical calibration},
   journal = {Philos Trans A Math Phys Eng Sci},
   volume = {376},
   number = {2128},
   ISSN = {1471-2962 (Electronic)
1364-503X (Linking)},
   DOI = {rsta.2017.0356 [pii]
10.1098/rsta.2017.0356},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30082302
https://escholarship.org/content/qt9zt4b12r/qt9zt4b12r.pdf?t=qr2v12},
   year = {2018},
   type = {Journal Article}
}

@article{RN117,
   author = {Mower, J. and Subramanian, D. and Cohen, T.},
   title = {Learning predictive models of drug side-effect relationships from distributed representations of literature-derived semantic predications},
   journal = {J Am Med Inform Assoc},
   volume = {25},
   number = {10},
   pages = {1339-1350},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5052182 [pii]
10.1093/jamia/ocy077},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30010902
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6454491/pdf/ocy077.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN119,
   author = {Levine, M. E. and Albers, D. J. and Hripcsak, G.},
   title = {Methodological variations in lagged regression for detecting physiologic drug effects in EHR data},
   journal = {J Biomed Inform},
   volume = {86},
   pages = {149-159},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(18)30173-4 [pii]
10.1016/j.jbi.2018.08.014},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30172760
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6207533/pdf/nihms-1507969.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN2,
   author = {Huser, V. and Kahn, M. G. and Brown, J. S. and Gouripeddi, R.},
   title = {Methods for examining data quality in healthcare integrated data repositories},
   journal = {Pac Symp Biocomput},
   volume = {23},
   pages = {628-633},
   ISSN = {2335-6936 (Electronic)
2335-6928 (Linking)},
   DOI = {9789813235533_0059 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29218922},
   year = {2018},
   type = {Journal Article}
}

@article{RN112,
   author = {Prokosch, H. U. and Acker, T. and Bernarding, J. and Binder, H. and Boeker, M. and Boerries, M. and Daumke, P. and Ganslandt, T. and Hesser, J. and Honing, G. and Neumaier, M. and Marquardt, K. and Renz, H. and Rothkotter, H. J. and Schade-Brittinger, C. and Schmucker, P. and Schuttler, J. and Sedlmayr, M. and Serve, H. and Sohrabi, K. and Storf, H.},
   title = {MIRACUM: Medical Informatics in Research and Care in University Medicine},
   journal = {Methods Inf Med},
   volume = {57},
   number = {S 01},
   pages = {e82-e91},
   ISSN = {2511-705X (Electronic)
0026-1270 (Linking)},
   DOI = {10.3414/ME17-02-0025},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30016814
https://www.thieme-connect.com/products/ejournals/pdf/10.3414/ME17-02-0025.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN120,
   author = {Hong, N. and Zhang, N. and Wu, H. and Lu, S. and Yu, Y. and Hou, L. and Lu, Y. and Liu, H. and Jiang, G.},
   title = {Preliminary exploration of survival analysis using the OHDSI common data model: a case study of intrahepatic cholangiocarcinoma},
   journal = {BMC Med Inform Decis Mak},
   volume = {18},
   number = {Suppl 5},
   pages = {116},
   ISSN = {1472-6947 (Electronic)
1472-6947 (Linking)},
   DOI = {10.1186/s12911-018-0686-7
10.1186/s12911-018-0686-7 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30526572
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6284277/pdf/12911_2018_Article_686.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN124,
   author = {Butler, A. and Wei, W. and Yuan, C. and Kang, T. and Si, Y. and Weng, C.},
   title = {The Data Gap in the EHR for Clinical Research Eligibility Screening},
   journal = {AMIA Jt Summits Transl Sci Proc},
   volume = {2017},
   pages = {320-329},
   ISSN = {2153-4063 (Print)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29888090
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961795/pdf/2840332.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN115,
   author = {Maier, C. and Lang, L. and Storf, H. and Vormstein, P. and Bieber, R. and Bernarding, J. and Herrmann, T. and Haverkamp, C. and Horki, P. and Laufer, J. and Berger, F. and Honing, G. and Fritsch, H. W. and Schuttler, J. and Ganslandt, T. and Prokosch, H. U. and Sedlmayr, M.},
   title = {Towards Implementation of OMOP in a German University Hospital Consortium},
   journal = {Appl Clin Inform},
   volume = {9},
   number = {1},
   pages = {54-61},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.1055/s-0037-1617452},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29365340
https://www.thieme-connect.com/products/ejournals/pdf/10.1055/s-0037-1617452.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN118,
   author = {Klann, J. G. and Phillips, L. C. and Herrick, C. and Joss, M. A. H. and Wagholikar, K. B. and Murphy, S. N.},
   title = {Web services for data warehouses: OMOP and PCORnet on i2b2},
   journal = {J Am Med Inform Assoc},
   volume = {25},
   number = {10},
   pages = {1331-1338},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {5061849 [pii]
10.1093/jamia/ocy093},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/30085008
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6188504/pdf/ocy093.pdf},
   year = {2018},
   type = {Journal Article}
}

@article{RN8,
   author = {Sun, Y. X. and Pei, Z. C. and Zhan, S. Y.},
   title = {[Data harmonization and sharing in study cohorts of respiratory diseases]},
   journal = {Zhonghua Liu Xing Bing Xue Za Zhi},
   volume = {39},
   number = {2},
   pages = {233-239},
   ISSN = {0254-6450 (Print)
0254-6450 (Linking)},
   DOI = {10.3760/cma.j.issn.0254-6450.2018.02.019},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29495212},
   year = {2018},
   type = {Journal Article}
}

@article{RN127,
   author = {Voss, E. A. and Boyce, R. D. and Ryan, P. B. and van der Lei, J. and Rijnbeek, P. R. and Schuemie, M. J.},
   title = {Accuracy of an automated knowledge base for identifying drug adverse reactions},
   journal = {J Biomed Inform},
   volume = {66},
   pages = {72-81},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(16)30179-4 [pii]
10.1016/j.jbi.2016.12.005},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27993747
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5316295/pdf/nihms841934.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN130,
   author = {Jiang, G. and Kiefer, R. C. and Sharma, D. K. and Prud'hommeaux, E. and Solbrig, H. R.},
   title = {A Consensus-Based Approach for Harmonizing the OHDSI Common Data Model with HL7 FHIR},
   journal = {Stud Health Technol Inform},
   volume = {245},
   pages = {887-891},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29295227
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-830-3-887},
   year = {2017},
   type = {Journal Article}
}

@article{RN134,
   author = {Chakrabarti, S. and Sen, A. and Huser, V. and Hruby, G. W. and Rusanov, A. and Albers, D. J. and Weng, C.},
   title = {An Interoperable Similarity-based Cohort Identification Method Using the OMOP Common Data Model version 5.0},
   journal = {J Healthc Inform Res},
   volume = {1},
   number = {1},
   pages = {1-18},
   ISSN = {2509-4971 (Print)
2509-498X (Linking)},
   DOI = {10.1007/s41666-017-0005-6},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28776047
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5536903/pdf/nihms883375.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN125,
   author = {Si, Y. and Weng, C.},
   title = {An OMOP CDM-Based Relational Database of Clinical Research Eligibility Criteria},
   journal = {Stud Health Technol Inform},
   volume = {245},
   pages = {950-954},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29295240
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-830-3-950},
   year = {2017},
   type = {Journal Article}
}

@article{RN35,
   author = {Ceusters, W. and Blaisure, J.},
   title = {A Realism-Based View on Counts in OMOP's Common Data Model},
   journal = {Stud Health Technol Inform},
   volume = {237},
   pages = {55-62},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28479543
https://ebooks.iospress.nl/publication/46421},
   year = {2017},
   type = {Journal Article}
}

@article{RN131,
   author = {Jiang, G. and Kiefer, R. and Prud'hommeaux, E. and Solbrig, H. R.},
   title = {Building Interoperable FHIR-Based Vocabulary Mapping Services: A Case Study of OHDSI Vocabularies and Mappings},
   journal = {Stud Health Technol Inform},
   volume = {245},
   pages = {1327},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29295408
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-830-3-1327},
   year = {2017},
   type = {Journal Article}
}

@article{RN123,
   author = {You, S. C. and Lee, S. and Cho, S. Y. and Park, H. and Jung, S. and Cho, J. and Yoon, D. and Park, R. W.},
   title = {Conversion of National Health Insurance Service-National Sample Cohort (NHIS-NSC) Database into Observational Medical Outcomes Partnership-Common Data Model (OMOP-CDM)},
   journal = {Stud Health Technol Inform},
   volume = {245},
   pages = {467-470},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29295138
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-830-3-467},
   year = {2017},
   type = {Journal Article}
}

@article{RN128,
   author = {Ong, T. C. and Kahn, M. G. and Kwan, B. M. and Yamashita, T. and Brandt, E. and Hosokawa, P. and Uhrich, C. and Schilling, L. M.},
   title = {Dynamic-ETL: a hybrid approach for health data extraction, transformation and loading},
   journal = {BMC Med Inform Decis Mak},
   volume = {17},
   number = {1},
   pages = {134},
   ISSN = {1472-6947 (Electronic)
1472-6947 (Linking)},
   DOI = {10.1186/s12911-017-0532-3
10.1186/s12911-017-0532-3 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28903729
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5598056/pdf/12911_2017_Article_532.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN136,
   author = {Banda, J. M. and Halpern, Y. and Sontag, D. and Shah, N. H.},
   title = {Electronic phenotyping with APHRODITE and the Observational Health Sciences and Informatics (OHDSI) data network},
   journal = {AMIA Jt Summits Transl Sci Proc},
   volume = {2017},
   pages = {48-57},
   ISSN = {2153-4063 (Print)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28815104
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543379/pdf/2611061.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN129,
   author = {Kang, T. and Zhang, S. and Tang, Y. and Hruby, G. W. and Rusanov, A. and Elhadad, N. and Weng, C.},
   title = {EliIE: An open-source information extraction system for clinical trial eligibility criteria},
   journal = {J Am Med Inform Assoc},
   volume = {24},
   number = {6},
   pages = {1062-1071},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {3098256 [pii]
10.1093/jamia/ocx019},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28379377
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6259668/pdf/ocx019.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN132,
   author = {Knowledge Base workgroup of the Observational Health Data, Sciences and Informatics, collaborative},
   title = {Large-scale adverse effects related to treatment evidence standardization (LAERTES): an open scalable system for linking pharmacovigilance evidence sources with clinical data},
   journal = {J Biomed Semantics},
   volume = {8},
   number = {1},
   pages = {11},
   ISSN = {2041-1480 (Electronic)},
   DOI = {10.1186/s13326-017-0115-3
10.1186/s13326-017-0115-3 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28270198
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5341176/pdf/13326_2017_Article_115.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN133,
   author = {Gini, R. and Schuemie, M. J. and Pasqua, A. and Carlini, E. and Profili, F. and Cricelli, I. and Dazzi, P. and Barletta, V. and Francesconi, P. and Lapi, F. and Donatini, A. and Dal Co, G. and Visca, M. and Bellentani, M. and Sturkenboom, M. and Klazinga, N.},
   title = {Monitoring compliance with standards of care for chronic diseases using healthcare administrative databases in Italy: Strengths and limitations},
   journal = {PLoS One},
   volume = {12},
   number = {12},
   pages = {e0188377},
   ISSN = {1932-6203 (Electronic)
1932-6203 (Linking)},
   DOI = {10.1371/journal.pone.0188377
PONE-D-16-51291 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29232365
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5726627/pdf/pone.0188377.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN3,
   author = {Moskovitch, R. and Polubriaginof, F. and Weiss, A. and Ryan, P. and Tatonetti, N.},
   title = {Procedure prediction from symbolic Electronic Health Records via time intervals analytics},
   journal = {J Biomed Inform},
   volume = {75},
   pages = {70-82},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(17)30178-8 [pii]
10.1016/j.jbi.2017.07.018},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28823923},
   year = {2017},
   type = {Journal Article}
}

@article{RN126,
   author = {Rosenbloom, S. T. and Carroll, R. J. and Warner, J. L. and Matheny, M. E. and Denny, J. C.},
   title = {Representing Knowledge Consistently Across Health Systems},
   journal = {Yearb Med Inform},
   volume = {26},
   number = {1},
   pages = {139-147},
   ISSN = {2364-0502 (Electronic)
0943-4747 (Linking)},
   DOI = {10.15265/IY-2017-018},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29063555
https://www.thieme-connect.com/products/ejournals/pdf/10.15265/IY-2017-018.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN135,
   author = {Duke, J. D. and Ryan, P. B. and Suchard, M. A. and Hripcsak, G. and Jin, P. and Reich, C. and Schwalm, M. S. and Khoma, Y. and Wu, Y. and Xu, H. and Shah, N. H. and Banda, J. M. and Schuemie, M. J.},
   title = {Risk of angioedema associated with levetiracetam compared with phenytoin: Findings of the observational health data sciences and informatics research network},
   journal = {Epilepsia},
   volume = {58},
   number = {8},
   pages = {e101-e106},
   ISSN = {1528-1167 (Electronic)
0013-9580 (Linking)},
   DOI = {10.1111/epi.13828},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28681416
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6632067/pdf/nihms-1034326.pdf},
   year = {2017},
   type = {Journal Article}
}

@article{RN144,
   author = {Gini, R. and Schuemie, M. J. and Mazzaglia, G. and Lapi, F. and Francesconi, P. and Pasqua, A. and Bianchini, E. and Montalbano, C. and Roberto, G. and Barletta, V. and Cricelli, I. and Cricelli, C. and Dal Co, G. and Bellentani, M. and Sturkenboom, M. and Klazinga, N.},
   title = {Automatic identification of type 2 diabetes, hypertension, ischaemic heart disease, heart failure and their levels of severity from Italian General Practitioners' electronic medical records: a validation study},
   journal = {BMJ Open},
   volume = {6},
   number = {12},
   pages = {e012413},
   ISSN = {2044-6055 (Electronic)
2044-6055 (Linking)},
   DOI = {bmjopen-2016-012413 [pii]
10.1136/bmjopen-2016-012413},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27940627
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5168667/pdf/bmjopen-2016-012413.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN141,
   author = {Hripcsak, G. and Ryan, P. B. and Duke, J. D. and Shah, N. H. and Park, R. W. and Huser, V. and Suchard, M. A. and Schuemie, M. J. and DeFalco, F. J. and Perotte, A. and Banda, J. M. and Reich, C. G. and Schilling, L. M. and Matheny, M. E. and Meeker, D. and Pratt, N. and Madigan, D.},
   title = {Characterizing treatment pathways at scale using the OHDSI network},
   journal = {Proc Natl Acad Sci U S A},
   volume = {113},
   number = {27},
   pages = {7329-36},
   ISSN = {1091-6490 (Electronic)
0027-8424 (Linking)},
   DOI = {1510502113 [pii]
10.1073/pnas.1510502113},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27274072
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941483/pdf/pnas.201510502.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN137,
   author = {Yoon, D. and Ahn, E. K. and Park, M. Y. and Cho, S. Y. and Ryan, P. and Schuemie, M. J. and Shin, D. and Park, H. and Park, R. W.},
   title = {Conversion and Data Quality Assessment of Electronic Health Record Data at a Korean Tertiary Teaching Hospital to a Common Data Model for Distributed Network Research},
   journal = {Healthc Inform Res},
   volume = {22},
   number = {1},
   pages = {54-8},
   ISSN = {2093-3681 (Print)
2093-3681 (Linking)},
   DOI = {10.4258/hir.2016.22.1.54},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26893951
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4756059/pdf/hir-22-54.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN145,
   author = {Gini, R. and Schuemie, M. and Brown, J. and Ryan, P. and Vacchi, E. and Coppola, M. and Cazzola, W. and Coloma, P. and Berni, R. and Diallo, G. and Oliveira, J. L. and Avillach, P. and Trifiro, G. and Rijnbeek, P. and Bellentani, M. and van Der Lei, J. and Klazinga, N. and Sturkenboom, M.},
   title = {Data Extraction and Management in Networks of Observational Health Care Databases for Scientific Research: A Comparison of EU-ADR, OMOP, Mini-Sentinel and MATRICE Strategies},
   journal = {EGEMS (Wash DC)},
   volume = {4},
   number = {1},
   pages = {1189},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.13063/2327-9214.1189
egems1189 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27014709
https://air.unimi.it/retrieve/handle/2434/394437/605935/eGEMs%2716%204%281%29.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN34,
   author = {Gruber, S. and Chakravarty, A. and Heckbert, S. R. and Levenson, M. and Martin, D. and Nelson, J. C. and Psaty, B. M. and Pinheiro, S. and Reich, C. G. and Toh, S. and Walker, A. M.},
   title = {Design and analysis choices for safety surveillance evaluations need to be tuned to the specifics of the hypothesized drug-outcome association},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {25},
   number = {9},
   pages = {973-81},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.4065},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27418432
https://onlinelibrary.wiley.com/doi/abs/10.1002/pds.4065},
   year = {2016},
   type = {Journal Article}
}

@article{RN147,
   author = {Garza, M. and Del Fiol, G. and Tenenbaum, J. and Walden, A. and Zozus, M. N.},
   title = {Evaluating common data models for use with a longitudinal community registry},
   journal = {J Biomed Inform},
   volume = {64},
   pages = {333-341},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(16)30153-8 [pii]
10.1016/j.jbi.2016.10.016},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27989817
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6810649/pdf/nihms-1534566.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN31,
   author = {Hauben, M. and Aronson, J. K. and Ferner, R. E.},
   title = {Evidence of Misclassification of Drug-Event Associations Classified as Gold Standard 'Negative Controls' by the Observational Medical Outcomes Partnership (OMOP)},
   journal = {Drug Saf},
   volume = {39},
   number = {5},
   pages = {421-32},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-016-0392-2
10.1007/s40264-016-0392-2 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26879560
https://link.springer.com/article/10.1007%2Fs40264-016-0392-2},
   year = {2016},
   type = {Journal Article}
}

@article{RN165,
   author = {Kim, H. and Choi, J. and Jang, I. and Quach, J. and Ohno-Machado, L.},
   title = {Feasibility of Representing Data from Published Nursing Research Using the OMOP Common Data Model},
   journal = {AMIA Annu Symp Proc},
   volume = {2016},
   pages = {715-723},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28269868
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5333244/pdf/2499977.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN138,
   author = {Sen, A. and Chakrabarti, S. and Goldstein, A. and Wang, S. and Ryan, P. B. and Weng, C.},
   title = {GIST 2.0: A scalable multi-trait metric for quantifying population representativeness of individual clinical studies},
   journal = {J Biomed Inform},
   volume = {63},
   pages = {325-336},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(16)30115-0 [pii]
10.1016/j.jbi.2016.09.003},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27600407
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5077682/pdf/nihms817522.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN143,
   author = {Gruber, S. and Tchetgen Tchetgen, E.},
   title = {Limitations of empirical calibration of p-values using observational data},
   journal = {Stat Med},
   volume = {35},
   number = {22},
   pages = {3869-82},
   ISSN = {1097-0258 (Electronic)
0277-6715 (Linking)},
   DOI = {10.1002/sim.6936},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26970249
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012943/pdf/nihms766743.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN140,
   author = {Huser, V. and DeFalco, F. J. and Schuemie, M. and Ryan, P. B. and Shang, N. and Velez, M. and Park, R. W. and Boyce, R. D. and Duke, J. and Khare, R. and Utidjian, L. and Bailey, C.},
   title = {Multisite Evaluation of a Data Quality Tool for Patient-Level Clinical Data Sets},
   journal = {EGEMS (Wash DC)},
   volume = {4},
   number = {1},
   pages = {1239},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.13063/2327-9214.1239
egems1239 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/28154833
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5226382/pdf/egems1239.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN164,
   author = {Boyce, R. D. and Handler, S. M. and Karp, J. F. and Perera, S. and Reynolds, C. F., 3rd},
   title = {Preparing Nursing Home Data from Multiple Sites for Clinical Research - A Case Study Using Observational Health Data Sciences and Informatics},
   journal = {EGEMS (Wash DC)},
   volume = {4},
   number = {1},
   pages = {1252},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.13063/2327-9214.1252
egems1252 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27891528
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5108634/pdf/egems1252.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN139,
   author = {Schuemie, M. J. and Hripcsak, G. and Ryan, P. B. and Madigan, D. and Suchard, M. A.},
   title = {Robust empirical calibration of p-values using observational data},
   journal = {Stat Med},
   volume = {35},
   number = {22},
   pages = {3883-8},
   ISSN = {1097-0258 (Electronic)
0277-6715 (Linking)},
   DOI = {10.1002/sim.6977},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/27592566
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5108459/pdf/SIM-35-3883.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN148,
   author = {Boland, M. R. and Jacunski, A. and Lorberbaum, T. and Romano, J. D. and Moskovitch, R. and Tatonetti, N. P.},
   title = {Systems biology approaches for identifying adverse drug reactions and elucidating their underlying biological mechanisms},
   journal = {Wiley Interdiscip Rev Syst Biol Med},
   volume = {8},
   number = {2},
   pages = {104-22},
   ISSN = {1939-005X (Electronic)
1939-005X (Linking)},
   DOI = {10.1002/wsbm.1323},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26559926
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4760887/pdf/nihms731462.pdf},
   year = {2016},
   type = {Journal Article}
}

@article{RN37,
   author = {Xu, Y. and Zhou, X. and Suehs, B. T. and Hartzema, A. G. and Kahn, M. G. and Moride, Y. and Sauer, B. C. and Liu, Q. and Moll, K. and Pasquale, M. K. and Nair, V. P. and Bate, A.},
   title = {A Comparative Assessment of Observational Medical Outcomes Partnership and Mini-Sentinel Common Data Models and Analytics: Implications for Active Drug Safety Surveillance},
   journal = {Drug Saf},
   volume = {38},
   number = {8},
   pages = {749-65},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-015-0297-5
10.1007/s40264-015-0297-5 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26055920
https://link.springer.com/article/10.1007%2Fs40264-015-0297-5},
   year = {2015},
   type = {Journal Article}
}

@article{RN154,
   author = {Li, Y. and Ryan, P. B. and Wei, Y. and Friedman, C.},
   title = {A Method to Combine Signals from Spontaneous Reporting Systems and Observational Healthcare Data to Detect Adverse Drug Reactions},
   journal = {Drug Saf},
   volume = {38},
   number = {10},
   pages = {895-908},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-015-0314-8
10.1007/s40264-015-0314-8 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26153397
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579260/pdf/40264_2015_Article_314.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN156,
   author = {Boland, M. R. and Shahn, Z. and Madigan, D. and Hripcsak, G. and Tatonetti, N. P.},
   title = {Birth month affects lifetime disease risk: a phenome-wide method},
   journal = {J Am Med Inform Assoc},
   volume = {22},
   number = {5},
   pages = {1042-53},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {ocv046 [pii]
10.1093/jamia/ocv046},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26041386
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4986668/pdf/ocv046.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN152,
   author = {Khalilia, M. and Choi, M. and Henderson, A. and Iyengar, S. and Braunstein, M. and Sun, J.},
   title = {Clinical Predictive Modeling Development and Deployment through FHIR Web Services},
   journal = {AMIA Annu Symp Proc},
   volume = {2015},
   pages = {717-26},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26958207
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765683/pdf/2248709.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN158,
   author = {FitzHenry, F. and Resnic, F. S. and Robbins, S. L. and Denton, J. and Nookala, L. and Meeker, D. and Ohno-Machado, L. and Matheny, M. E.},
   title = {Creating a Common Data Model for Comparative Effectiveness with the Observational Medical Outcomes Partnership},
   journal = {Appl Clin Inform},
   volume = {6},
   number = {3},
   pages = {536-47},
   ISSN = {1869-0327 (Electronic)
1869-0327 (Linking)},
   DOI = {10.4338/ACI-2014-12-CR-0121},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26448797
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586341/pdf/ACI-06-0536.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN155,
   author = {Boland, M. R. and Tatonetti, N. P. and Hripcsak, G.},
   title = {Development and validation of a classification approach for extracting severity automatically from electronic health records},
   journal = {J Biomed Semantics},
   volume = {6},
   pages = {14},
   ISSN = {2041-1480 (Print)},
   DOI = {10.1186/s13326-015-0010-8
10 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25848530
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386082/pdf/13326_2015_Article_10.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN149,
   author = {Voss, E. A. and Makadia, R. and Matcho, A. and Ma, Q. and Knoll, C. and Schuemie, M. and DeFalco, F. J. and Londhe, A. and Zhu, V. and Ryan, P. B.},
   title = {Feasibility and utility of applications of the common data model to multiple, disparate observational health databases},
   journal = {J Am Med Inform Assoc},
   volume = {22},
   number = {3},
   pages = {553-64},
   ISSN = {1527-974X (Electronic)
1067-5027 (Linking)},
   DOI = {ocu023 [pii]
10.1093/jamia/ocu023},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25670757
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4457111/pdf/ocu023.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN151,
   author = {Vilar, S. and Lorberbaum, T. and Hripcsak, G. and Tatonetti, N. P.},
   title = {Improving Detection of Arrhythmia Drug-Drug Interactions in Pharmacovigilance Data through the Implementation of Similarity-Based Modeling},
   journal = {PLoS One},
   volume = {10},
   number = {6},
   pages = {e0129974},
   ISSN = {1932-6203 (Electronic)
1932-6203 (Linking)},
   DOI = {10.1371/journal.pone.0129974
PONE-D-15-04363 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26068584
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4466327/pdf/pone.0129974.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN153,
   author = {Hripcsak, G. and Duke, J. D. and Shah, N. H. and Reich, C. G. and Huser, V. and Schuemie, M. J. and Suchard, M. A. and Park, R. W. and Wong, I. C. and Rijnbeek, P. R. and van der Lei, J. and Pratt, N. and Noren, G. N. and Li, Y. C. and Stang, P. E. and Madigan, D. and Ryan, P. B.},
   title = {Observational Health Data Sciences and Informatics (OHDSI): Opportunities for Observational Researchers},
   journal = {Stud Health Technol Inform},
   volume = {216},
   pages = {574-8},
   ISSN = {1879-8365 (Electronic)
0926-9630 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26262116
https://ebooks.iospress.nl/pdf/doi/10.3233/978-1-61499-564-7-574},
   year = {2015},
   type = {Journal Article}
}

@article{RN7,
   author = {Sun, H. and Depraetere, K. and De Roo, J. and Mels, G. and De Vloed, B. and Twagirumukiza, M. and Colaert, D.},
   title = {Semantic processing of EHR data for clinical research},
   journal = {J Biomed Inform},
   volume = {58},
   pages = {247-259},
   ISSN = {1532-0480 (Electronic)
1532-0464 (Linking)},
   DOI = {S1532-0464(15)00231-2 [pii]
10.1016/j.jbi.2015.10.009},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26515501},
   year = {2015},
   type = {Journal Article}
}

@article{RN150,
   author = {Voss, E. A. and Ma, Q. and Ryan, P. B.},
   title = {The impact of standardizing the definition of visits on the consistency of multi-database observational health research},
   journal = {BMC Med Res Methodol},
   volume = {15},
   pages = {13},
   ISSN = {1471-2288 (Electronic)
1471-2288 (Linking)},
   DOI = {10.1186/s12874-015-0001-6
10.1186/s12874-015-0001-6 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25887092
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4369827/pdf/12874_2015_Article_1.pdf},
   year = {2015},
   type = {Journal Article}
}

@article{RN36,
   author = {Garbe, E. and Pigeot, I.},
   title = {[Benefits of large healthcare databases for drug risk research]
Der Nutzen grosser Gesundheitsdatenbanken fur die Arzneimittelrisikoforschung},
   journal = {Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz},
   volume = {58},
   number = {8},
   pages = {829-837},
   ISSN = {1437-1588 (Electronic)
1436-9990 (Linking)},
   DOI = {10.1007/s00103-015-2185-7
10.1007/s00103-015-2185-7 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/26092163
https://link.springer.com/article/10.1007%2Fs00103-015-2185-7},
   year = {2015},
   type = {Journal Article}
}

@article{RN162,
   author = {Boyce, R. D. and Ryan, P. B. and Noren, G. N. and Schuemie, M. J. and Reich, C. and Duke, J. and Tatonetti, N. P. and Trifiro, G. and Harpaz, R. and Overhage, J. M. and Hartzema, A. G. and Khayter, M. and Voss, E. A. and Lambert, C. G. and Huser, V. and Dumontier, M.},
   title = {Bridging islands of information to establish an integrated knowledge base of drugs and health outcomes of interest},
   journal = {Drug Saf},
   volume = {37},
   number = {8},
   pages = {557-67},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-014-0189-0},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/24985530
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4134480/pdf/40264_2014_Article_189.pdf},
   year = {2014},
   type = {Journal Article}
}

@article{RN159,
   author = {Trifiro, G. and Coloma, P. M. and Rijnbeek, P. R. and Romio, S. and Mosseveld, B. and Weibel, D. and Bonhoeffer, J. and Schuemie, M. and van der Lei, J. and Sturkenboom, M.},
   title = {Combining multiple healthcare databases for postmarketing drug and vaccine safety surveillance: why and how?},
   journal = {J Intern Med},
   volume = {275},
   number = {6},
   pages = {551-61},
   ISSN = {1365-2796 (Electronic)
0954-6820 (Linking)},
   DOI = {10.1111/joim.12159},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/24635221
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1111/joim.12159?download=true},
   year = {2014},
   type = {Journal Article}
}

@article{RN160,
   author = {Rijnbeek, P. R.},
   title = {Converting to a common data model: what is lost in translation? : Commentary on "fidelity assessment of a clinical practice research datalink conversion to the OMOP common data model"},
   journal = {Drug Saf},
   volume = {37},
   number = {11},
   pages = {893-6},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-014-0221-4},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25187018
https://link.springer.com/content/pdf/10.1007/s40264-014-0221-4.pdf},
   year = {2014},
   type = {Journal Article}
}

@article{RN161,
   author = {Matcho, A. and Ryan, P. and Fife, D. and Reich, C.},
   title = {Fidelity assessment of a clinical practice research datalink conversion to the OMOP common data model},
   journal = {Drug Saf},
   volume = {37},
   number = {11},
   pages = {945-59},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-014-0214-3},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25187016
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4206771/pdf/40264_2014_Article_214.pdf},
   year = {2014},
   type = {Journal Article}
}

@article{RN157,
   author = {Vilar, S. and Ryan, P. B. and Madigan, D. and Stang, P. E. and Schuemie, M. J. and Friedman, C. and Tatonetti, N. P. and Hripcsak, G.},
   title = {Similarity-based modeling applied to signal detection in pharmacovigilance},
   journal = {CPT Pharmacometrics Syst Pharmacol},
   volume = {3},
   pages = {e137},
   ISSN = {2163-8306 (Print)
2163-8306 (Linking)},
   DOI = {psp201435 [pii]
10.1038/psp.2014.35},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25250527
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211266/pdf/psp201435a.pdf},
   year = {2014},
   type = {Journal Article}
}

@article{RN163,
   author = {Makadia, R. and Ryan, P. B.},
   title = {Transforming the Premier Perspective Hospital Database into the Observational Medical Outcomes Partnership (OMOP) Common Data Model},
   journal = {EGEMS (Wash DC)},
   volume = {2},
   number = {1},
   pages = {1110},
   ISSN = {2327-9214 (Print)
2327-9214 (Linking)},
   DOI = {10.13063/2327-9214.1110
egems1110 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/25848597
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371500/pdf/egems1110.pdf},
   year = {2014},
   type = {Journal Article}
}

@article{RN38,
   author = {Lian Duan, L. and Khoshneshin, M. and Street, W. N. and Liu, M.},
   title = {Adverse drug effect detection},
   journal = {IEEE J Biomed Health Inform},
   volume = {17},
   number = {2},
   pages = {305-11},
   ISSN = {2168-2208 (Electronic)
2168-2194 (Linking)},
   DOI = {10.1109/TITB.2012.2227272},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/24235108
https://ieeexplore.ieee.org/document/6399500/},
   year = {2013},
   type = {Journal Article}
}

@article{RN39,
   author = {Zhou, X. and Murugesan, S. and Bhullar, H. and Liu, Q. and Cai, B. and Wentworth, C. and Bate, A.},
   title = {An evaluation of the THIN database in the OMOP Common Data Model for active drug safety surveillance},
   journal = {Drug Saf},
   volume = {36},
   number = {2},
   pages = {119-34},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-012-0009-3},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23329543
https://link.springer.com/article/10.1007%2Fs40264-012-0009-3},
   year = {2013},
   type = {Journal Article}
}

@article{RN167,
   author = {Defalco, F. J. and Ryan, P. B. and Soledad Cepeda, M.},
   title = {Applying standardized drug terminologies to observational healthcare databases: a case study on opioid exposure},
   journal = {Health Serv Outcomes Res Methodol},
   volume = {13},
   number = {1},
   pages = {58-67},
   ISSN = {1387-3741 (Print)
1387-3741 (Linking)},
   DOI = {10.1007/s10742-012-0102-1
102 [pii]},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23396660
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3566397/pdf/10742_2012_Article_102.pdf},
   year = {2013},
   type = {Journal Article}
}

@article{RN166,
   author = {Huser, V. and Cimino, J. J.},
   title = {Desiderata for healthcare integrated data repositories based on architectural comparison of three public repositories},
   journal = {AMIA Annu Symp Proc},
   volume = {2013},
   pages = {648-56},
   ISSN = {1942-597X (Electronic)
1559-4076 (Linking)},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/24551366
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900207/pdf/amia_2013_symposium_648.pdf},
   year = {2013},
   type = {Journal Article}
}

@article{RN4,
   author = {Ogunyemi, O. I. and Meeker, D. and Kim, H. E. and Ashish, N. and Farzaneh, S. and Boxwala, A.},
   title = {Identifying appropriate reference data models for comparative effectiveness research (CER) studies based on data from clinical information systems},
   journal = {Med Care},
   volume = {51},
   number = {8 Suppl 3},
   pages = {S45-52},
   ISSN = {1537-1948 (Electronic)
0025-7079 (Linking)},
   DOI = {10.1097/MLR.0b013e31829b1e0b},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23774519},
   year = {2013},
   type = {Journal Article}
}

@article{RN170,
   author = {Harpaz, R. and DuMouchel, W. and LePendu, P. and Bauer-Mehren, A. and Ryan, P. and Shah, N. H.},
   title = {Performance of pharmacovigilance signal-detection algorithms for the FDA adverse event reporting system},
   journal = {Clin Pharmacol Ther},
   volume = {93},
   number = {6},
   pages = {539-46},
   ISSN = {1532-6535 (Electronic)
0009-9236 (Linking)},
   DOI = {clpt201324 [pii]
10.1038/clpt.2013.24},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23571771
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857139/pdf/nihms525848.pdf},
   year = {2013},
   type = {Journal Article}
}

@article{RN40,
   author = {Schuemie, M. J. and Gini, R. and Coloma, P. M. and Straatman, H. and Herings, R. M. and Pedersen, L. and Innocenti, F. and Mazzaglia, G. and Picelli, G. and van der Lei, J. and Sturkenboom, M. C.},
   title = {Replication of the OMOP experiment in Europe: evaluating methods for risk identification in electronic health record databases},
   journal = {Drug Saf},
   volume = {36 Suppl 1},
   pages = {S159-69},
   ISSN = {1179-1942 (Electronic)
0114-5916 (Linking)},
   DOI = {10.1007/s40264-013-0109-8},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/24166232
https://link.springer.com/article/10.1007%2Fs40264-013-0109-8},
   year = {2013},
   type = {Journal Article}
}

@article{RN33,
   author = {Li, X. and Hui, S. and Ryan, P. and Rosenman, M. and Overhage, M.},
   title = {Statistical visualization for assessing performance of methods for safety surveillance using electronic databases},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {22},
   number = {5},
   pages = {503-9},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.3419},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23408560
https://onlinelibrary.wiley.com/doi/abs/10.1002/pds.3419},
   year = {2013},
   type = {Journal Article}
}

@article{RN32,
   author = {Ryan, P. B. and Madigan, D. and Stang, P. E. and Overhage, J. M. and Racoosin, J. A. and Hartzema, A. G.},
   title = {Empirical assessment of methods for risk identification in healthcare data: results from the experiments of the Observational Medical Outcomes Partnership},
   journal = {Stat Med},
   volume = {31},
   number = {30},
   pages = {4401-15},
   ISSN = {1097-0258 (Electronic)
0277-6715 (Linking)},
   DOI = {10.1002/sim.5620},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/23015364
https://onlinelibrary.wiley.com/doi/abs/10.1002/sim.5620},
   year = {2012},
   type = {Journal Article}
}

@article{RN5,
   author = {Reich, C. and Ryan, P. B. and Stang, P. E. and Rocca, M.},
   title = {Evaluation of alternative standardized terminologies for medical conditions within a network of observational healthcare databases},
   journal = {J Biomed Inform},
   volume = {45},
   number = {4},
   pages = {689-96},
   ISSN = {1532-0480 (Electronic)
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10.1016/j.jbi.2012.05.002},
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   year = {2012},
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}

@article{RN169,
   author = {Carnahan, R. M. and Moores, K. G.},
   title = {Mini-Sentinel's systematic reviews of validated methods for identifying health outcomes using administrative and claims data: methods and lessons learned},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {21 Suppl 1},
   pages = {82-9},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.2321},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/22262596
https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/pds.2321?download=true},
   year = {2012},
   type = {Journal Article}
}

@article{RN168,
   author = {Overhage, J. M. and Ryan, P. B. and Reich, C. G. and Hartzema, A. G. and Stang, P. E.},
   title = {Validation of a common data model for active safety surveillance research},
   journal = {J Am Med Inform Assoc},
   volume = {19},
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   pages = {54-60},
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10.1136/amiajnl-2011-000376},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/22037893
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3240764/pdf/amiajnl-2011-000376.pdf},
   year = {2012},
   type = {Journal Article}
}

@article{RN30,
   author = {Schuemie, M. J.},
   title = {Methods for drug safety signal detection in longitudinal observational databases: LGPS and LEOPARD},
   journal = {Pharmacoepidemiol Drug Saf},
   volume = {20},
   number = {3},
   pages = {292-9},
   ISSN = {1099-1557 (Electronic)
1053-8569 (Linking)},
   DOI = {10.1002/pds.2051},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/20945505
https://onlinelibrary.wiley.com/doi/abs/10.1002/pds.2051},
   year = {2011},
   type = {Journal Article}
}